diff --git a/.buildkite/pipeline.yml b/.buildkite/pipeline.yml index 13ab31716..65a492637 100644 --- a/.buildkite/pipeline.yml +++ b/.buildkite/pipeline.yml @@ -1,5 +1,5 @@ env: - JULIA_VERSION: "1.9.3" + JULIA_VERSION: "1.10.0" OPENMPI_VERSION: "4.1.5" CUDA_VERSION: "11.2" CLIMACOMMS_DEVICE: "CPU" diff --git a/.github/workflows/CodeCov.yml b/.github/workflows/CodeCov.yml index 9a2e54f98..306572fb3 100644 --- a/.github/workflows/CodeCov.yml +++ b/.github/workflows/CodeCov.yml @@ -14,7 +14,7 @@ jobs: - name: Set up Julia uses: julia-actions/setup-julia@latest with: - version: 1.9.3 + version: 1.10.0 - name: Test with coverage env: diff --git a/.github/workflows/JuliaFormatter.yml b/.github/workflows/JuliaFormatter.yml index 042720d03..6b97d88dd 100644 --- a/.github/workflows/JuliaFormatter.yml +++ b/.github/workflows/JuliaFormatter.yml @@ -27,7 +27,7 @@ jobs: - uses: julia-actions/setup-julia@latest if: steps.filter.outputs.julia_file_change == 'true' with: - version: 1.9.3 + version: 1.10.0 - name: Apply JuliaFormatter if: steps.filter.outputs.julia_file_change == 'true' diff --git a/.github/workflows/UpDeps.yml b/.github/workflows/UpDeps.yml index 359954035..caba2ba0a 100644 --- a/.github/workflows/UpDeps.yml +++ b/.github/workflows/UpDeps.yml @@ -19,7 +19,7 @@ jobs: - uses: julia-actions/setup-julia@latest with: - version: 1.9.3 + version: 1.10.0 - name: Apply UpDeps run: | diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index f45375717..46835f7c7 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -12,7 +12,7 @@ jobs: fail-fast: false matrix: version: - - '1.9' + - '1.10' os: - ubuntu-latest - macOS-latest diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml index c540c4ba1..a2b6c990d 100644 --- a/.github/workflows/docs.yml +++ b/.github/workflows/docs.yml @@ -14,7 +14,7 @@ jobs: - uses: actions/checkout@v2 - uses: julia-actions/setup-julia@latest with: - version: 1.9.3 + version: 1.10.0 - name: Install dependencies run: julia --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()' - name: Build and deploy diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 02d17eb63..33ec65a78 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -1,13 +1,13 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.9.3" +julia_version = "1.10.0" manifest_format = "2.0" project_hash = "215492e25d9450f745b793c4e2a289f956e81a5b" [[deps.ADTypes]] -git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" +git-tree-sha1 = "41c37aa88889c171f1300ceac1313c06e891d245" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.5" +version = "0.2.6" [[deps.ANSIColoredPrinters]] git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c" @@ -27,9 +27,9 @@ weakdeps = ["ChainRulesCore", "Test"] [[deps.Accessors]] deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Test"] -git-tree-sha1 = "a7055b939deae2455aa8a67491e034f735dd08d3" +git-tree-sha1 = "cb96992f1bec110ad211b7e410e57ddf7944c16f" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.33" +version = "0.1.35" [deps.Accessors.extensions] AccessorsAxisKeysExt = "AxisKeys" @@ -46,9 +46,9 @@ version = "0.1.33" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "02f731463748db57cc2ebfbd9fbc9ce8280d3433" +git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.1" +version = "3.7.2" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -77,9 +77,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "247efbccf92448be332d154d6ca56b9fcdd93c31" +git-tree-sha1 = "bbec08a37f8722786d87bedf84eae19c020c4efa" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.6.1" +version = "7.7.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -99,9 +99,9 @@ version = "7.6.1" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "af43df5704827c8618afd36eb56fcab20d3041ee" +git-tree-sha1 = "f5c3f5584f14322a0bd73362fd88b589dabd4019" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.4.3" +version = "1.5.3" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -136,9 +136,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" +git-tree-sha1 = "27baf04c642465b4289179f29bb7127f0673d4f1" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.1" +version = "1.4.0" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -146,9 +146,9 @@ weakdeps = ["SparseArrays"] [[deps.BangBang]] deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] -git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" +git-tree-sha1 = "7aa7ad1682f3d5754e3491bb59b8103cae28e3a3" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.39" +version = "0.3.40" [deps.BangBang.extensions] BangBangChainRulesCoreExt = "ChainRulesCore" @@ -172,6 +172,12 @@ git-tree-sha1 = "aebf55e6d7795e02ca500a689d326ac979aaf89e" uuid = "9718e550-a3fa-408a-8086-8db961cd8217" version = "0.1.1" +[[deps.BenchmarkTools]] +deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] +git-tree-sha1 = "f1f03a9fa24271160ed7e73051fba3c1a759b53f" +uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" +version = "1.4.0" + [[deps.BibInternal]] git-tree-sha1 = "0c62b284a52ec39ee831e10bf62c17d587dde75f" uuid = "2027ae74-3657-4b95-ae00-e2f7d55c3e64" @@ -202,20 +208,20 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "54cd829dd26330c42e1cf9df68470dd4df602c61" +git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.38" +version = "0.16.39" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" +git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.8+0" +version = "1.0.8+1" [[deps.CEnum]] -git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +git-tree-sha1 = "389ad5c84de1ae7cf0e28e381131c98ea87d54fc" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.4.2" +version = "0.5.0" [[deps.CFTime]] deps = ["Dates", "Printf"] @@ -237,9 +243,9 @@ version = "0.2.4" [[deps.CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "Statistics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "76582ae19006b1186e87dadd781747f76cead72c" +git-tree-sha1 = "95ac638373ac40e29c1b6d086a3698f5026ff6a6" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.1.1" +version = "5.1.2" weakdeps = ["ChainRulesCore", "SpecialFunctions"] [deps.CUDA.extensions] @@ -248,15 +254,15 @@ weakdeps = ["ChainRulesCore", "SpecialFunctions"] [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "1e42ef1bdb45487ff28de16182c0df4920181dc3" +git-tree-sha1 = "d01bfc999768f0a31ed36f5d22a76161fc63079c" uuid = "4ee394cb-3365-5eb0-8335-949819d2adfc" -version = "0.7.0+0" +version = "0.7.0+1" [[deps.CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "bcc4a23cbbd99c8535a5318455dcf0f2546ec536" +git-tree-sha1 = "2cb12f6b2209f40a4b8967697689a47c50485490" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.2.2" +version = "0.2.3" [[deps.CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] @@ -278,15 +284,15 @@ version = "0.5.1" [[deps.ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"] -git-tree-sha1 = "006cc7170be3e0fa02ccac6d4164a1eee1fc8c27" +git-tree-sha1 = "213f001d1233fd3b8ef007f50c8cab29061917d8" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.58.0" +version = "1.61.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "e0af648f0692ec1691b5d094b8724ba1346281cf" +git-tree-sha1 = "1287e3872d646eed95198457873249bd9f0caed2" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.18.0" +version = "1.20.1" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -322,11 +328,17 @@ git-tree-sha1 = "d412a157375b445f251e3c95c61bc127bf8e1bdb" uuid = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b" version = "0.11.0" +[[deps.CodecBzip2]] +deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] +git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" +uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" +version = "0.8.2" + [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "cd67fc487743b2f0fd4380d4cbd3a24660d0eec8" +git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.3" +version = "0.7.4" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] @@ -374,10 +386,10 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[deps.Compat]] -deps = ["UUIDs"] -git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d" +deps = ["TOML", "UUIDs"] +git-tree-sha1 = "75bd5b6fc5089df449b5d35fa501c846c9b6549b" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.10.1" +version = "4.12.0" weakdeps = ["Dates", "LinearAlgebra"] [deps.Compat.extensions] @@ -386,7 +398,7 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.5+0" +version = "1.0.5+1" [[deps.CompositionsBase]] git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" @@ -448,9 +460,9 @@ uuid = "7445602f-e544-4518-8976-18f8e8ae6cdb" version = "0.2.4" [[deps.DataAPI]] -git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" +git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.15.0" +version = "1.16.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "DataStructures", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -460,9 +472,9 @@ version = "1.6.1" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d" +git-tree-sha1 = "ac67408d9ddf207de5cfa9a97e114352430f01ed" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.15" +version = "0.18.16" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -498,9 +510,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "309efb205c30d43b595466283bbecf2769283e22" +git-tree-sha1 = "05b19d9101db42afeb02d1f402d5e9a7986c44f7" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.141.0" +version = "6.145.2" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -528,9 +540,9 @@ version = "6.141.0" [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "57ed4597a309c5b2a10cab5f9813adcb78f92117" +git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.19.0" +version = "5.20.0" [deps.DiffEqNoiseProcess.extensions] DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" @@ -567,9 +579,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "a6c00f894f24460379cb7136633cef54ac9f6f4a" +git-tree-sha1 = "7c302d7a5fec5214eb8a5a4c466dcf7a51fcf169" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.103" +version = "0.25.107" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -621,10 +633,13 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -deps = ["Adapt"] -git-tree-sha1 = "2efe862de93cd87f620ad6ac9c9e3f83f1b2841b" +git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.4" +version = "0.6.5" +weakdeps = ["Adapt"] + + [deps.EnzymeCore.extensions] + AdaptExt = "Adapt" [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -634,9 +649,9 @@ version = "0.0.20230411+0" [[deps.ExceptionUnwrapping]] deps = ["Test"] -git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" +git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" -version = "0.1.9" +version = "0.1.10" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -669,9 +684,9 @@ version = "4.4.2+2" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "b4fbdd20c889804969571cc589900803edda16b7" +git-tree-sha1 = "4820348781ae578893311153d69049a93d05f39d" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.7.1" +version = "1.8.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -704,30 +719,30 @@ version = "0.3.2" [[deps.FastGaussQuadrature]] deps = ["LinearAlgebra", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "93ff6a4d5e7bfe27732259bfabbdd19940d8af1f" +git-tree-sha1 = "fd923962364b645f3719855c88f7074413a6ad92" uuid = "442a2c76-b920-505d-bb47-c5924d526838" -version = "1.0.0" +version = "1.0.2" [[deps.FastLapackInterface]] deps = ["LinearAlgebra"] -git-tree-sha1 = "b12f05108e405dadcc2aff0008db7f831374e051" +git-tree-sha1 = "d576a29bf8bcabf4b1deb9abe88a3d7f78306ab5" uuid = "29a986be-02c6-4525-aec4-84b980013641" -version = "2.0.0" +version = "2.0.1" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" +git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.1" +version = "1.16.2" [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "28e4e9c4b7b162398ec8004bdabe9a90c78c122d" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.8.0" +version = "1.9.3" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -737,9 +752,9 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] -git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" +git-tree-sha1 = "73d1214fec245096717847c62d389a5d2ac86504" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.21.1" +version = "2.22.0" [deps.FiniteDiff.extensions] FiniteDiffBandedMatricesExt = "BandedMatrices" @@ -764,10 +779,10 @@ uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" version = "0.8.4" [[deps.Flux]] -deps = ["Adapt", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "b97c3fc4f3628b8835d83789b09382961a254da4" +deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] +git-tree-sha1 = "39a9e46b4e92d5b56c0712adeb507555a2327240" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.6" +version = "0.14.11" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -837,10 +852,10 @@ deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[deps.GLFW_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] -git-tree-sha1 = "d972031d28c8c8d9d7b41a536ad7bb0c2579caca" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] +git-tree-sha1 = "ff38ba61beff76b8f4acad8ab0c97ef73bb670cb" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.3.8+0" +version = "3.3.9+0" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] @@ -862,15 +877,15 @@ version = "0.25.0" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "27442171f28c952804dede8ff72828a96f2bfc1f" +git-tree-sha1 = "3458564589be207fa6a77dbbf8b97674c9836aab" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.72.10" +version = "0.73.2" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "FreeType2_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "025d171a2847f616becc0f84c8dc62fe18f0f6dd" +git-tree-sha1 = "77f81da2964cc9fa7c0127f941e8bce37f7f1d70" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.72.10+0" +version = "0.73.2+0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -965,15 +980,15 @@ version = "0.3.23" [[deps.IOCapture]] deps = ["Logging", "Random"] -git-tree-sha1 = "d75853a0bdbfb1ac815478bacd89cd27b550ace6" +git-tree-sha1 = "8b72179abc660bfab5e28472e019392b97d0985c" uuid = "b5f81e59-6552-4d32-b1f0-c071b021bf89" -version = "0.2.3" +version = "0.2.4" [[deps.IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "8aa91235360659ca7560db43a7d57541120aa31d" +git-tree-sha1 = "5d8c5713f38f7bc029e26627b687710ba406d0dd" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.11" +version = "0.4.12" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -1002,10 +1017,10 @@ uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" version = "0.1.2" [[deps.IntelOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "ad37c091f7d7daf900963171600d7c1c5c3ede32" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "5fdf2fe6724d8caabf43b557b84ce53f3b7e2f6b" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2023.2.0+0" +version = "2024.0.2+0" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -1062,9 +1077,15 @@ version = "0.21.4" [[deps.JSON3]] deps = ["Dates", "Mmap", "Parsers", "PrecompileTools", "StructTypes", "UUIDs"] -git-tree-sha1 = "95220473901735a0f4df9d1ca5b171b568b2daa3" +git-tree-sha1 = "eb3edce0ed4fa32f75a0a11217433c31d56bd48b" uuid = "0f8b85d8-7281-11e9-16c2-39a750bddbf1" -version = "1.13.2" +version = "1.14.0" + + [deps.JSON3.extensions] + JSON3ArrowExt = ["ArrowTypes"] + + [deps.JSON3.weakdeps] + ArrowTypes = "31f734f8-188a-4ce0-8406-c8a06bd891cd" [[deps.JSONSchema]] deps = ["Downloads", "JSON", "JSON3", "URIs"] @@ -1074,9 +1095,9 @@ version = "1.3.0" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" +git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "2.1.91+0" +version = "3.0.1+0" [[deps.JuliaNVTXCallbacks_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1091,10 +1112,10 @@ uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" [[deps.JumpProcesses]] -deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "3de1d557e382cad270d921fbc22351f5628e7b1f" +deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"] +git-tree-sha1 = "c451feb97251965a9fe40bacd62551a72cc5902c" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.8.0" +version = "9.10.1" weakdeps = ["FastBroadcast"] [deps.JumpProcesses.extensions] @@ -1108,9 +1129,9 @@ version = "0.4.1" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" +git-tree-sha1 = "4e0cb2f5aad44dcfdc91088e85dee4ecb22c791c" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.13" +version = "0.9.16" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1118,9 +1139,9 @@ weakdeps = ["EnzymeCore"] [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "17e462054b42dcdda73e9a9ba0c67754170c88ae" +git-tree-sha1 = "8a6837ec02fe5fb3def1abc907bb802ef11a0729" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.4" +version = "0.9.5" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1136,9 +1157,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "c879e47398a7ab671c782e02b51a4456794a7fa3" +git-tree-sha1 = "cb4619f7353fc62a1a22ffa3d7ed9791cfb47ad8" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.4.0" +version = "6.4.2" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -1156,10 +1177,10 @@ uuid = "8b046642-f1f6-4319-8d3c-209ddc03c586" version = "1.0.0" [[deps.LLVMOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "f689897ccbe049adb19a065c495e75f372ecd42b" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "d986ce2d884d49126836ea94ed5bfb0f12679713" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "15.0.4+0" +version = "15.0.7+0" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1209,6 +1230,16 @@ git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" version = "0.15.1" +[[deps.LazyArrays]] +deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays"] +git-tree-sha1 = "9cfca23ab83b0dfac93cb1a1ef3331ab9fe596a5" +uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" +version = "1.8.3" +weakdeps = ["StaticArrays"] + + [deps.LazyArrays.extensions] + LazyArraysStaticArraysExt = "StaticArrays" + [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" @@ -1222,21 +1253,26 @@ version = "1.0.0" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" -version = "0.6.3" +version = "0.6.4" [[deps.LibCURL_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" -version = "7.84.0+0" +version = "8.4.0+0" [[deps.LibGit2]] -deps = ["Base64", "NetworkOptions", "Printf", "SHA"] +deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" +[[deps.LibGit2_jll]] +deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"] +uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5" +version = "1.6.4+0" + [[deps.LibSSH2_jll]] deps = ["Artifacts", "Libdl", "MbedTLS_jll"] uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" -version = "1.10.2+0" +version = "1.11.0+1" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -1300,16 +1336,16 @@ deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] -deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "UnPack"] -git-tree-sha1 = "051943b8b8e81c548e9d099d6eb3d3ed23093c35" +deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "6f8e084deabe3189416c4e505b1c53e1b590cae8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.20.0" +version = "2.22.1" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" LinearSolveBlockDiagonalsExt = "BlockDiagonals" LinearSolveCUDAExt = "CUDA" - LinearSolveEnzymeExt = "Enzyme" + LinearSolveEnzymeExt = ["Enzyme", "EnzymeCore"] LinearSolveFastAlmostBandedMatricesExt = ["FastAlmostBandedMatrices"] LinearSolveHYPREExt = "HYPRE" LinearSolveIterativeSolversExt = "IterativeSolvers" @@ -1324,6 +1360,7 @@ version = "2.20.0" BlockDiagonals = "0a1fb500-61f7-11e9-3c65-f5ef3456f9f0" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" FastAlmostBandedMatrices = "9d29842c-ecb8-4973-b1e9-a27b1157504e" HYPRE = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771" IterativeSolvers = "42fd0dbc-a981-5370-80f2-aaf504508153" @@ -1370,10 +1407,10 @@ weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] SpecialFunctionsExt = "SpecialFunctions" [[deps.MKL_jll]] -deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "eb006abbd7041c28e0d16260e50a24f8f9104913" +deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"] +git-tree-sha1 = "72dc3cf284559eb8f53aa593fe62cb33f83ed0c0" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2023.2.0+0" +version = "2024.0.0+0" [[deps.MLStyle]] git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" @@ -1382,9 +1419,9 @@ version = "0.4.17" [[deps.MLUtils]] deps = ["ChainRulesCore", "Compat", "DataAPI", "DelimitedFiles", "FLoops", "NNlib", "Random", "ShowCases", "SimpleTraits", "Statistics", "StatsBase", "Tables", "Transducers"] -git-tree-sha1 = "3504cdb8c2bc05bde4d4b09a81b01df88fcbbba0" +git-tree-sha1 = "b45738c2e3d0d402dffa32b2c1654759a2ac35a4" uuid = "f1d291b0-491e-4a28-83b9-f70985020b54" -version = "0.4.3" +version = "0.4.4" [[deps.MPI]] deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PkgVersion", "PrecompileTools", "Requires", "Serialization", "Sockets"] @@ -1402,9 +1439,9 @@ version = "0.20.19" [[deps.MPICH_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "8a5b4d2220377d1ece13f49438d71ad20cf1ba83" +git-tree-sha1 = "2ee75365ca243c1a39d467e35ffd3d4d32eef11e" uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4" -version = "4.1.2+0" +version = "4.1.2+1" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] @@ -1414,15 +1451,15 @@ version = "0.1.10" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "6979eccb6a9edbbb62681e158443e79ecc0d056a" +git-tree-sha1 = "8eeb3c73bbc0ca203d0dc8dad4008350bbe5797b" uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748" -version = "5.3.1+0" +version = "5.3.1+1" [[deps.MacroTools]] deps = ["Markdown", "Random"] -git-tree-sha1 = "9ee1618cbf5240e6d4e0371d6f24065083f60c48" +git-tree-sha1 = "2fa9ee3e63fd3a4f7a9a4f4744a52f4856de82df" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.11" +version = "0.5.13" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1433,6 +1470,24 @@ version = "0.1.8" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" +[[deps.MathOptInterface]] +deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] +git-tree-sha1 = "8b40681684df46785a0012d352982e22ac3be59e" +uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" +version = "1.25.2" + +[[deps.MatrixFactorizations]] +deps = ["ArrayLayouts", "LinearAlgebra", "Printf", "Random"] +git-tree-sha1 = "78f6e33434939b0ac9ba1df81e6d005ee85a7396" +uuid = "a3b82374-2e81-5b9e-98ce-41277c0e4c87" +version = "2.1.0" + +[[deps.MaybeInplace]] +deps = ["ArrayInterface", "LinearAlgebra", "MacroTools", "SparseArrays"] +git-tree-sha1 = "a85c6a98c9e5a2a7046bc1bb89f28a3241e1de4d" +uuid = "bb5d69b7-63fc-4a16-80bd-7e42200c7bdb" +version = "0.1.1" + [[deps.MbedTLS]] deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf" @@ -1442,7 +1497,7 @@ version = "1.1.9" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" -version = "2.28.2+0" +version = "2.28.2+1" [[deps.Measures]] git-tree-sha1 = "c13304c81eec1ed3af7fc20e75fb6b26092a1102" @@ -1472,13 +1527,19 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" -version = "2022.10.11" +version = "2023.1.10" [[deps.MuladdMacro]] git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.4" +[[deps.MutableArithmetics]] +deps = ["LinearAlgebra", "SparseArrays", "Test"] +git-tree-sha1 = "806eea990fb41f9b36f1253e5697aa645bf6a9f8" +uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" +version = "1.4.0" + [[deps.NCDatasets]] deps = ["CFTime", "CommonDataModel", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"] git-tree-sha1 = "4263c4220f22e20729329838bf7e94a49d1ac32f" @@ -1499,9 +1560,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "ac86d2944bf7a670ac8bf0f7ec099b5898abcc09" +git-tree-sha1 = "d2811b435d2f571bdfdfa644bb806a66b458e186" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.8" +version = "0.9.11" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1517,9 +1578,9 @@ version = "0.9.8" [[deps.NVTX]] deps = ["Colors", "JuliaNVTXCallbacks_jll", "Libdl", "NVTX_jll"] -git-tree-sha1 = "8bc9ce4233be3c63f8dcd78ccaf1b63a9c0baa34" +git-tree-sha1 = "53046f0483375e3ed78e49190f1154fa0a4083a1" uuid = "5da4648a-3479-48b8-97b9-01cb529c0a1f" -version = "0.3.3" +version = "0.3.4" [[deps.NVTX_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1550,26 +1611,37 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "6166ccd8f79c93c636ca61ab4cd18f555932563d" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "767100434dc775c993082e70e453ba7bd9866afa" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.8.2" +version = "3.1.0" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" NonlinearSolveLeastSquaresOptimExt = "LeastSquaresOptim" + NonlinearSolveMINPACKExt = "MINPACK" + NonlinearSolveNLsolveExt = "NLsolve" + NonlinearSolveSymbolicsExt = "Symbolics" + NonlinearSolveZygoteExt = "Zygote" [deps.NonlinearSolve.weakdeps] BandedMatrices = "aae01518-5342-5314-be14-df237901396f" FastLevenbergMarquardt = "7a0df574-e128-4d35-8cbd-3d84502bf7ce" LeastSquaresOptim = "0fc2ff8b-aaa3-5acd-a817-1944a5e08891" + MINPACK = "4854310b-de5a-5eb6-a2a5-c1dee2bd17f9" + NLsolve = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" + Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.OffsetArrays]] -deps = ["Adapt"] -git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" +git-tree-sha1 = "6a731f2b5c03157418a20c12195eb4b74c8f8621" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.10" +version = "1.13.0" +weakdeps = ["Adapt"] + + [deps.OffsetArrays.extensions] + OffsetArraysAdaptExt = "Adapt" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1579,19 +1651,19 @@ version = "1.3.5+1" [[deps.OneHotArrays]] deps = ["Adapt", "ChainRulesCore", "Compat", "GPUArraysCore", "LinearAlgebra", "NNlib"] -git-tree-sha1 = "5e4029759e8699ec12ebdf8721e51a659443403c" +git-tree-sha1 = "963a3f28a2e65bb87a68033ea4a616002406037d" uuid = "0b1bfda6-eb8a-41d2-88d8-f5af5cad476f" -version = "0.2.4" +version = "0.2.5" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.21+4" +version = "0.3.23+2" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" -version = "0.8.1+0" +version = "0.8.1+2" [[deps.OpenMPI_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] @@ -1624,10 +1696,10 @@ uuid = "47cfafe2-3833-4da3-8183-ce14c2b92cbd" version = "0.1.3" [[deps.Optim]] -deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "01f85d9269b13fedc61e63cc72ee2213565f7a72" +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "47fea72de134f75b105a5d4a1abe5c6aec89d390" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.7.8" +version = "1.9.1" [[deps.Optimisers]] deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] @@ -1647,21 +1719,21 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.6.3" [[deps.OrdinaryDiffEq]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "5f9e7ce227d0e447c3803cc05ef5d8f75f84b9ea" +deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "96ae028da53cdfe24712ab015a6f854cfd7609c0" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.59.3" +version = "6.66.0" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" -version = "10.42.0+0" +version = "10.42.0+1" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "4e5be6bb265d33669f98eb55d2a57addd1eeb72c" +git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.30" +version = "0.11.31" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1677,9 +1749,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates", "PrecompileTools", "UUIDs"] -git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf" +git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.8.0" +version = "2.8.1" [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1695,7 +1767,7 @@ version = "0.42.2+0" [[deps.Pkg]] deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" -version = "1.9.2" +version = "1.10.0" [[deps.PkgVersion]] deps = ["Pkg"] @@ -1711,15 +1783,15 @@ version = "3.1.0" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" +git-tree-sha1 = "862942baf5663da528f66d24996eb6da85218e76" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.5" +version = "1.4.0" [[deps.Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "ccee59c6e48e6f2edf8a5b64dc817b6729f99eb5" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "38a748946dca52a622e79eea6ed35c6737499109" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.39.0" +version = "1.40.0" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1766,10 +1838,10 @@ uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" version = "0.2.4" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] -git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" +deps = ["Adapt", "ArrayInterface", "ForwardDiff"] +git-tree-sha1 = "64bb68f76f789f5fe5930a80af310f19cdafeaed" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.12" +version = "0.4.17" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" @@ -1810,6 +1882,10 @@ version = "0.5.5" deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" +[[deps.Profile]] +deps = ["Printf"] +uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" + [[deps.ProgressBars]] deps = ["Printf"] git-tree-sha1 = "b437cdb0385ed38312d91d9c00c20f3798b30256" @@ -1830,9 +1906,9 @@ version = "6.5.2+2" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" +git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.9.1" +version = "2.9.4" [[deps.QuasiMonteCarlo]] deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] @@ -1849,14 +1925,14 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" [[deps.Random]] -deps = ["SHA", "Serialization"] +deps = ["SHA"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" +git-tree-sha1 = "c860e84651f58ce240dd79e5d9e055d55234c35a" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.1" +version = "1.6.2" [[deps.RandomNumbers]] deps = ["Random", "Requires"] @@ -1982,9 +2058,9 @@ version = "0.9.13" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "d432b4c4cc922fb7b21b555c138aa87f9fb7beb8" +git-tree-sha1 = "32ea825941f7b58a6f48268f4b76971ae8eb9eec" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.9.1" +version = "2.10.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2003,12 +2079,6 @@ version = "2.9.1" RCall = "6f49c342-dc21-5d91-9882-a32aef131414" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" -[[deps.SciMLNLSolve]] -deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "765b788339abd7d983618c09cfc0192e2b6b15fd" -uuid = "e9a6253c-8580-4d32-9898-8661bb511710" -version = "0.1.9" - [[deps.SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] git-tree-sha1 = "51ae235ff058a64815e0a2c34b1db7578a06813d" @@ -2057,14 +2127,18 @@ uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" [[deps.SimpleNonlinearSolve]] -deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "69b1a53374dd14d7c165d98cb646aeb5f36f8d07" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "470c5f97af31fa35926b45eb01e53a46c8d7d35f" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.25" -weakdeps = ["NNlib"] +version = "1.3.1" [deps.SimpleNonlinearSolve.extensions] - SimpleNonlinearSolveNNlibExt = "NNlib" + SimpleNonlinearSolvePolyesterForwardDiffExt = "PolyesterForwardDiff" + SimpleNonlinearSolveStaticArraysExt = "StaticArrays" + + [deps.SimpleNonlinearSolve.weakdeps] + PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -2088,35 +2162,38 @@ uuid = "6462fe0b-24de-5631-8697-dd941f90decc" [[deps.SortingAlgorithms]] deps = ["DataStructures"] -git-tree-sha1 = "5165dfb9fd131cf0c6957a3a7605dede376e7b63" +git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085" uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" -version = "1.2.0" +version = "1.2.1" [[deps.SparseArrays]] deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" +version = "1.10.0" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" +git-tree-sha1 = "3b38ae7a1cbe9b8b1344359599753957644b03d4" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.13.0" +version = "2.16.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" + SparseDiffToolsPolyesterForwardDiffExt = "PolyesterForwardDiff" SparseDiffToolsSymbolicsExt = "Symbolics" SparseDiffToolsZygoteExt = "Zygote" [deps.SparseDiffTools.weakdeps] Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SparseInverseSubset]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "91402087fd5d13b2d97e3ef29bbdf9d7859e678a" +git-tree-sha1 = "52962839426b75b3021296f7df242e40ecfc0852" uuid = "dc90abb0-5640-4711-901d-7e5b23a2fada" -version = "0.1.1" +version = "0.1.2" [[deps.Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] @@ -2148,9 +2225,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2159,12 +2236,13 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" +git-tree-sha1 = "7b0e9c14c624e435076d19aea1e5cbdec2b9ca37" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.7.0" -weakdeps = ["Statistics"] +version = "1.9.2" +weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] + StaticArraysChainRulesCoreExt = "ChainRulesCore" StaticArraysStatisticsExt = "Statistics" [[deps.StaticArraysCore]] @@ -2175,7 +2253,7 @@ version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" -version = "1.9.0" +version = "1.10.0" [[deps.StatsAPI]] deps = ["LinearAlgebra"] @@ -2201,10 +2279,10 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"] StatsFunsInverseFunctionsExt = "InverseFunctions" [[deps.StochasticDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "7a71f1e67cbcfcd5387707e6621431d1afff62a9" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "753219de57ac7aab0feb88871d3c51e0eb5e3b03" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.63.2" +version = "6.64.0" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] @@ -2226,9 +2304,9 @@ version = "0.3.4" [[deps.StructArrays]] deps = ["Adapt", "ConstructionBase", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"] -git-tree-sha1 = "0a3db38e4cce3c54fe7a71f831cd7b6194a54213" +git-tree-sha1 = "1b0b1205a56dc288b71b1961d48e351520702e24" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.16" +version = "0.6.17" [[deps.StructTypes]] deps = ["Dates", "UUIDs"] @@ -2241,9 +2319,9 @@ deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse_jll]] -deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +deps = ["Artifacts", "Libdl", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" -version = "5.10.1+6" +version = "7.2.1+1" [[deps.Suppressor]] deps = ["Logging"] @@ -2287,9 +2365,9 @@ version = "1.10.0" [[deps.TaylorSeries]] deps = ["LinearAlgebra", "Markdown", "Requires", "SparseArrays"] -git-tree-sha1 = "62e17af1466940d0c24b207b5bca744ffb27816e" +git-tree-sha1 = "9138fdc8ee4e3b8839eca696a76d15e16c9c7af0" uuid = "6aa5eb33-94cf-58f4-a9d0-e4b2c4fc25ea" -version = "0.15.3" +version = "0.15.4" [deps.TaylorSeries.extensions] TaylorSeriesIAExt = "IntervalArithmetic" @@ -2341,9 +2419,9 @@ weakdeps = ["Random", "Test"] [[deps.Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "ConstructionBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "e579d3c991938fecbb225699e8f611fa3fbf2141" +git-tree-sha1 = "3064e780dbb8a9296ebb3af8f440f787bb5332af" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.79" +version = "0.4.80" [deps.Transducers.extensions] TransducersBlockArraysExt = "BlockArrays" @@ -2359,12 +2437,6 @@ version = "0.4.79" OnlineStatsBase = "925886fa-5bf2-5e8e-b522-a9147a512338" Referenceables = "42d2dcc6-99eb-4e98-b66c-637b7d73030e" -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" - [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] git-tree-sha1 = "fadebab77bf3ae041f77346dd1c290173da5a443" @@ -2488,15 +2560,15 @@ version = "1.21.0+1" [[deps.Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4528479aa01ee1b3b4cd0e6faef0e04cf16466da" +git-tree-sha1 = "93f43ab61b16ddfb2fd3bb13b3ce241cafb0e6c9" uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.25.0+0" +version = "1.31.0+0" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "da69178aacc095066bad1f69d2f59a60a1dd8ad1" +git-tree-sha1 = "801cbe47eae69adc50f36c3caec4758d2650741b" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.0+0" +version = "2.12.2+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2663,7 +2735,7 @@ version = "0.4.9" [[deps.Zlib_jll]] deps = ["Libdl"] uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.13+0" +version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2673,9 +2745,9 @@ version = "1.5.5+0" [[deps.Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5ded212acd815612df112bb895ef3910c5a03f57" +git-tree-sha1 = "4ddb4470e47b0094c93055a3bcae799165cc68f1" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.67" +version = "0.6.69" [deps.Zygote.extensions] ZygoteColorsExt = "Colors" @@ -2689,9 +2761,9 @@ version = "0.6.67" [[deps.ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] -git-tree-sha1 = "9d749cd449fb448aeca4feee9a2f4186dbb5d184" +git-tree-sha1 = "27798139afc0a2afa7b1824c206d5e87ea587a00" uuid = "700de1a5-db45-46bc-99cf-38207098b444" -version = "0.2.4" +version = "0.2.5" [[deps.eudev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "gperf_jll"] @@ -2726,7 +2798,7 @@ version = "0.15.1+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" -version = "5.8.0+0" +version = "5.8.0+1" [[deps.libevdev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -2747,10 +2819,10 @@ uuid = "36db933b-70db-51c0-b978-0f229ee0e533" version = "1.18.0+0" [[deps.libpng_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.38+0" +version = "1.6.40+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] @@ -2767,12 +2839,12 @@ version = "1.1.6+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.48.0+0" +version = "1.52.0+1" [[deps.p7zip_jll]] deps = ["Artifacts", "Libdl"] uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" -version = "17.4.0+0" +version = "17.4.0+2" [[deps.x264_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] diff --git a/integration_tests/Manifest.toml b/integration_tests/Manifest.toml index a5879f7db..de3138cc9 100644 --- a/integration_tests/Manifest.toml +++ b/integration_tests/Manifest.toml @@ -1,13 +1,13 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.9.3" +julia_version = "1.10.0" manifest_format = "2.0" project_hash = "040af4979d073cdae89a200ac35d4c63ce21fe6b" [[deps.ADTypes]] -git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" +git-tree-sha1 = "41c37aa88889c171f1300ceac1313c06e891d245" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.5" +version = "0.2.6" [[deps.AbstractFFTs]] deps = ["LinearAlgebra"] @@ -27,9 +27,9 @@ version = "0.4.4" [[deps.Accessors]] deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Test"] -git-tree-sha1 = "a7055b939deae2455aa8a67491e034f735dd08d3" +git-tree-sha1 = "cb96992f1bec110ad211b7e410e57ddf7944c16f" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.33" +version = "0.1.35" [deps.Accessors.extensions] AccessorsAxisKeysExt = "AxisKeys" @@ -46,9 +46,9 @@ version = "0.1.33" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "02f731463748db57cc2ebfbd9fbc9ce8280d3433" +git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.1" +version = "3.7.2" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -77,9 +77,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "247efbccf92448be332d154d6ca56b9fcdd93c31" +git-tree-sha1 = "bbec08a37f8722786d87bedf84eae19c020c4efa" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.6.1" +version = "7.7.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -99,9 +99,9 @@ version = "7.6.1" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "af43df5704827c8618afd36eb56fcab20d3041ee" +git-tree-sha1 = "f5c3f5584f14322a0bd73362fd88b589dabd4019" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.4.3" +version = "1.5.3" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -136,9 +136,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" +git-tree-sha1 = "27baf04c642465b4289179f29bb7127f0673d4f1" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.1" +version = "1.4.0" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -146,9 +146,9 @@ weakdeps = ["SparseArrays"] [[deps.BangBang]] deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] -git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" +git-tree-sha1 = "7aa7ad1682f3d5754e3491bb59b8103cae28e3a3" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.39" +version = "0.3.40" [deps.BangBang.extensions] BangBangChainRulesCoreExt = "ChainRulesCore" @@ -172,6 +172,12 @@ git-tree-sha1 = "aebf55e6d7795e02ca500a689d326ac979aaf89e" uuid = "9718e550-a3fa-408a-8086-8db961cd8217" version = "0.1.1" +[[deps.BenchmarkTools]] +deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] +git-tree-sha1 = "f1f03a9fa24271160ed7e73051fba3c1a759b53f" +uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" +version = "1.4.0" + [[deps.BitFlags]] git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" @@ -185,15 +191,15 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "54cd829dd26330c42e1cf9df68470dd4df602c61" +git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.38" +version = "0.16.39" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" +git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.8+0" +version = "1.0.8+1" [[deps.CEnum]] git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" @@ -232,9 +238,9 @@ version = "0.5.0+1" [[deps.CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "bcc4a23cbbd99c8535a5318455dcf0f2546ec536" +git-tree-sha1 = "2cb12f6b2209f40a4b8967697689a47c50485490" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.2.2" +version = "0.2.3" [[deps.CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] @@ -256,15 +262,15 @@ version = "0.5.1" [[deps.ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"] -git-tree-sha1 = "006cc7170be3e0fa02ccac6d4164a1eee1fc8c27" +git-tree-sha1 = "213f001d1233fd3b8ef007f50c8cab29061917d8" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.58.0" +version = "1.61.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "e0af648f0692ec1691b5d094b8724ba1346281cf" +git-tree-sha1 = "1287e3872d646eed95198457873249bd9f0caed2" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.18.0" +version = "1.20.1" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -306,11 +312,17 @@ git-tree-sha1 = "c0216e792f518b39b22212127d4a84dc31e4e386" uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2" version = "1.3.5" +[[deps.CodecBzip2]] +deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] +git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" +uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" +version = "0.8.2" + [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "cd67fc487743b2f0fd4380d4cbd3a24660d0eec8" +git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.3" +version = "0.7.4" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] @@ -358,10 +370,10 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[deps.Compat]] -deps = ["UUIDs"] -git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d" +deps = ["TOML", "UUIDs"] +git-tree-sha1 = "75bd5b6fc5089df449b5d35fa501c846c9b6549b" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.10.1" +version = "4.12.0" weakdeps = ["Dates", "LinearAlgebra"] [deps.Compat.extensions] @@ -370,7 +382,7 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.5+0" +version = "1.0.5+1" [[deps.CompositionsBase]] git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" @@ -449,15 +461,15 @@ uuid = "7445602f-e544-4518-8976-18f8e8ae6cdb" version = "0.2.4" [[deps.DataAPI]] -git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" +git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.15.0" +version = "1.16.0" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d" +git-tree-sha1 = "ac67408d9ddf207de5cfa9a97e114352430f01ed" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.15" +version = "0.18.16" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -493,9 +505,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "309efb205c30d43b595466283bbecf2769283e22" +git-tree-sha1 = "05b19d9101db42afeb02d1f402d5e9a7986c44f7" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.141.0" +version = "6.145.2" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -523,9 +535,9 @@ version = "6.141.0" [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "57ed4597a309c5b2a10cab5f9813adcb78f92117" +git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.19.0" +version = "5.20.0" [deps.DiffEqNoiseProcess.extensions] DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" @@ -562,9 +574,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "a6c00f894f24460379cb7136633cef54ac9f6f4a" +git-tree-sha1 = "7c302d7a5fec5214eb8a5a4c466dcf7a51fcf169" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.103" +version = "0.25.107" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -604,10 +616,13 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -deps = ["Adapt"] -git-tree-sha1 = "2efe862de93cd87f620ad6ac9c9e3f83f1b2841b" +git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.4" +version = "0.6.5" +weakdeps = ["Adapt"] + + [deps.EnzymeCore.extensions] + AdaptExt = "Adapt" [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -617,9 +632,9 @@ version = "0.0.20230411+0" [[deps.ExceptionUnwrapping]] deps = ["Test"] -git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" +git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" -version = "0.1.9" +version = "0.1.10" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -652,9 +667,9 @@ version = "4.4.2+2" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "b4fbdd20c889804969571cc589900803edda16b7" +git-tree-sha1 = "4820348781ae578893311153d69049a93d05f39d" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.7.1" +version = "1.8.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -687,30 +702,30 @@ version = "0.3.2" [[deps.FastGaussQuadrature]] deps = ["LinearAlgebra", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "93ff6a4d5e7bfe27732259bfabbdd19940d8af1f" +git-tree-sha1 = "fd923962364b645f3719855c88f7074413a6ad92" uuid = "442a2c76-b920-505d-bb47-c5924d526838" -version = "1.0.0" +version = "1.0.2" [[deps.FastLapackInterface]] deps = ["LinearAlgebra"] -git-tree-sha1 = "b12f05108e405dadcc2aff0008db7f831374e051" +git-tree-sha1 = "d576a29bf8bcabf4b1deb9abe88a3d7f78306ab5" uuid = "29a986be-02c6-4525-aec4-84b980013641" -version = "2.0.0" +version = "2.0.1" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" +git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.1" +version = "1.16.2" [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "28e4e9c4b7b162398ec8004bdabe9a90c78c122d" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.8.0" +version = "1.9.3" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -720,9 +735,9 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] -git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" +git-tree-sha1 = "73d1214fec245096717847c62d389a5d2ac86504" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.21.1" +version = "2.22.0" [deps.FiniteDiff.extensions] FiniteDiffBandedMatricesExt = "BandedMatrices" @@ -753,10 +768,10 @@ uuid = "08572546-2f56-4bcf-ba4e-bab62c3a3f89" version = "1.0.0" [[deps.Flux]] -deps = ["Adapt", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "b97c3fc4f3628b8835d83789b09382961a254da4" +deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] +git-tree-sha1 = "39a9e46b4e92d5b56c0712adeb507555a2327240" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.6" +version = "0.14.11" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -832,10 +847,10 @@ deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[deps.GLFW_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] -git-tree-sha1 = "d972031d28c8c8d9d7b41a536ad7bb0c2579caca" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] +git-tree-sha1 = "ff38ba61beff76b8f4acad8ab0c97ef73bb670cb" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.3.8+0" +version = "3.3.9+0" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] @@ -857,15 +872,15 @@ version = "0.21.4" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "27442171f28c952804dede8ff72828a96f2bfc1f" +git-tree-sha1 = "3458564589be207fa6a77dbbf8b97674c9836aab" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.72.10" +version = "0.73.2" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "FreeType2_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "025d171a2847f616becc0f84c8dc62fe18f0f6dd" +git-tree-sha1 = "77f81da2964cc9fa7c0127f941e8bce37f7f1d70" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.72.10+0" +version = "0.73.2+0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -960,9 +975,9 @@ version = "0.3.23" [[deps.IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "8aa91235360659ca7560db43a7d57541120aa31d" +git-tree-sha1 = "5d8c5713f38f7bc029e26627b687710ba406d0dd" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.11" +version = "0.4.12" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -990,10 +1005,10 @@ uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" version = "0.1.2" [[deps.IntelOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "ad37c091f7d7daf900963171600d7c1c5c3ede32" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "5fdf2fe6724d8caabf43b557b84ce53f3b7e2f6b" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2023.2.0+0" +version = "2024.0.2+0" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -1027,9 +1042,9 @@ version = "1.0.0" [[deps.JET]] deps = ["InteractiveUtils", "JuliaInterpreter", "LoweredCodeUtils", "MacroTools", "Pkg", "PrecompileTools", "Preferences", "Revise", "Test"] -git-tree-sha1 = "e67f79f53406ef949dfcaaf775043ed14aac1cc2" +git-tree-sha1 = "5d420ad1241871a0a7a68c6d95b1b9a3b94f8dd1" uuid = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b" -version = "0.8.20" +version = "0.8.22" [[deps.JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -1051,20 +1066,20 @@ version = "0.21.4" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" +git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "2.1.91+0" +version = "3.0.1+0" [[deps.JuliaInterpreter]] deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"] -git-tree-sha1 = "e49bce680c109bc86e3e75ebcb15040d6ad9e1d3" +git-tree-sha1 = "04663b9e1eb0d0eabf76a6d0752e0dac83d53b36" uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a" -version = "0.9.27" +version = "0.9.28" [[deps.JuliaSyntax]] -git-tree-sha1 = "1a4857ab55396b2da745f07f76ce4e696207b740" +git-tree-sha1 = "e00e2b013f3bd98d3789f889b9305c1546ecd1ab" uuid = "70703baa-626e-46a2-a12c-08ffd08c73b4" -version = "0.4.7" +version = "0.4.8" [[deps.JuliaVariables]] deps = ["MLStyle", "NameResolution"] @@ -1073,10 +1088,10 @@ uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" [[deps.JumpProcesses]] -deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "3de1d557e382cad270d921fbc22351f5628e7b1f" +deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"] +git-tree-sha1 = "c451feb97251965a9fe40bacd62551a72cc5902c" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.8.0" +version = "9.10.1" weakdeps = ["FastBroadcast"] [deps.JumpProcesses.extensions] @@ -1090,9 +1105,9 @@ version = "0.4.1" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" +git-tree-sha1 = "4e0cb2f5aad44dcfdc91088e85dee4ecb22c791c" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.13" +version = "0.9.16" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1100,9 +1115,9 @@ weakdeps = ["EnzymeCore"] [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "17e462054b42dcdda73e9a9ba0c67754170c88ae" +git-tree-sha1 = "8a6837ec02fe5fb3def1abc907bb802ef11a0729" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.4" +version = "0.9.5" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1118,9 +1133,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "c879e47398a7ab671c782e02b51a4456794a7fa3" +git-tree-sha1 = "cb4619f7353fc62a1a22ffa3d7ed9791cfb47ad8" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.4.0" +version = "6.4.2" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -1133,10 +1148,10 @@ uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" version = "0.0.27+1" [[deps.LLVMOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "f689897ccbe049adb19a065c495e75f372ecd42b" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "d986ce2d884d49126836ea94ed5bfb0f12679713" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "15.0.4+0" +version = "15.0.7+0" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1186,6 +1201,16 @@ git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" version = "0.15.1" +[[deps.LazyArrays]] +deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays"] +git-tree-sha1 = "9cfca23ab83b0dfac93cb1a1ef3331ab9fe596a5" +uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" +version = "1.8.3" +weakdeps = ["StaticArrays"] + + [deps.LazyArrays.extensions] + LazyArraysStaticArraysExt = "StaticArrays" + [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" @@ -1205,21 +1230,26 @@ version = "1.0.0" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" -version = "0.6.3" +version = "0.6.4" [[deps.LibCURL_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" -version = "7.84.0+0" +version = "8.4.0+0" [[deps.LibGit2]] -deps = ["Base64", "NetworkOptions", "Printf", "SHA"] +deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" +[[deps.LibGit2_jll]] +deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"] +uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5" +version = "1.6.4+0" + [[deps.LibSSH2_jll]] deps = ["Artifacts", "Libdl", "MbedTLS_jll"] uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" -version = "1.10.2+0" +version = "1.11.0+1" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -1354,15 +1384,15 @@ weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] [[deps.LoweredCodeUtils]] deps = ["JuliaInterpreter"] -git-tree-sha1 = "c165f205e030208760ebd75b5e1f7706761d9218" +git-tree-sha1 = "20ce1091ba18bcdae71ad9b71ee2367796ba6c48" uuid = "6f1432cf-f94c-5a45-995e-cdbf5db27b0b" -version = "2.3.1" +version = "2.4.4" [[deps.MKL_jll]] -deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "eb006abbd7041c28e0d16260e50a24f8f9104913" +deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"] +git-tree-sha1 = "72dc3cf284559eb8f53aa593fe62cb33f83ed0c0" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2023.2.0+0" +version = "2024.0.0+0" [[deps.MLStyle]] git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" @@ -1371,9 +1401,9 @@ version = "0.4.17" [[deps.MLUtils]] deps = ["ChainRulesCore", "Compat", "DataAPI", "DelimitedFiles", "FLoops", "NNlib", "Random", "ShowCases", "SimpleTraits", "Statistics", "StatsBase", "Tables", "Transducers"] -git-tree-sha1 = "3504cdb8c2bc05bde4d4b09a81b01df88fcbbba0" +git-tree-sha1 = "b45738c2e3d0d402dffa32b2c1654759a2ac35a4" uuid = "f1d291b0-491e-4a28-83b9-f70985020b54" -version = "0.4.3" +version = "0.4.4" [[deps.MPI]] deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PkgVersion", "PrecompileTools", "Requires", "Serialization", "Sockets"] @@ -1391,9 +1421,9 @@ version = "0.20.19" [[deps.MPICH_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "8a5b4d2220377d1ece13f49438d71ad20cf1ba83" +git-tree-sha1 = "2ee75365ca243c1a39d467e35ffd3d4d32eef11e" uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4" -version = "4.1.2+0" +version = "4.1.2+1" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] @@ -1403,15 +1433,15 @@ version = "0.1.10" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "6979eccb6a9edbbb62681e158443e79ecc0d056a" +git-tree-sha1 = "8eeb3c73bbc0ca203d0dc8dad4008350bbe5797b" uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748" -version = "5.3.1+0" +version = "5.3.1+1" [[deps.MacroTools]] deps = ["Markdown", "Random"] -git-tree-sha1 = "9ee1618cbf5240e6d4e0371d6f24065083f60c48" +git-tree-sha1 = "2fa9ee3e63fd3a4f7a9a4f4744a52f4856de82df" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.11" +version = "0.5.13" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1422,6 +1452,24 @@ version = "0.1.8" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" +[[deps.MathOptInterface]] +deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] +git-tree-sha1 = "8b40681684df46785a0012d352982e22ac3be59e" +uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" +version = "1.25.2" + +[[deps.MatrixFactorizations]] +deps = ["ArrayLayouts", "LinearAlgebra", "Printf", "Random"] +git-tree-sha1 = "78f6e33434939b0ac9ba1df81e6d005ee85a7396" +uuid = "a3b82374-2e81-5b9e-98ce-41277c0e4c87" +version = "2.1.0" + +[[deps.MaybeInplace]] +deps = ["ArrayInterface", "LinearAlgebra", "MacroTools", "SparseArrays"] +git-tree-sha1 = "a85c6a98c9e5a2a7046bc1bb89f28a3241e1de4d" +uuid = "bb5d69b7-63fc-4a16-80bd-7e42200c7bdb" +version = "0.1.1" + [[deps.MbedTLS]] deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf" @@ -1431,7 +1479,7 @@ version = "1.1.9" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" -version = "2.28.2+0" +version = "2.28.2+1" [[deps.Measures]] git-tree-sha1 = "c13304c81eec1ed3af7fc20e75fb6b26092a1102" @@ -1461,13 +1509,19 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" -version = "2022.10.11" +version = "2023.1.10" [[deps.MuladdMacro]] git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.4" +[[deps.MutableArithmetics]] +deps = ["LinearAlgebra", "SparseArrays", "Test"] +git-tree-sha1 = "806eea990fb41f9b36f1253e5697aa645bf6a9f8" +uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" +version = "1.4.0" + [[deps.NCDatasets]] deps = ["CFTime", "CommonDataModel", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"] git-tree-sha1 = "4263c4220f22e20729329838bf7e94a49d1ac32f" @@ -1488,9 +1542,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "ac86d2944bf7a670ac8bf0f7ec099b5898abcc09" +git-tree-sha1 = "d2811b435d2f571bdfdfa644bb806a66b458e186" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.8" +version = "0.9.11" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1527,26 +1581,37 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "6166ccd8f79c93c636ca61ab4cd18f555932563d" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "767100434dc775c993082e70e453ba7bd9866afa" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.8.2" +version = "3.1.0" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" NonlinearSolveLeastSquaresOptimExt = "LeastSquaresOptim" + NonlinearSolveMINPACKExt = "MINPACK" + NonlinearSolveNLsolveExt = "NLsolve" + NonlinearSolveSymbolicsExt = "Symbolics" + NonlinearSolveZygoteExt = "Zygote" [deps.NonlinearSolve.weakdeps] BandedMatrices = "aae01518-5342-5314-be14-df237901396f" FastLevenbergMarquardt = "7a0df574-e128-4d35-8cbd-3d84502bf7ce" LeastSquaresOptim = "0fc2ff8b-aaa3-5acd-a817-1944a5e08891" + MINPACK = "4854310b-de5a-5eb6-a2a5-c1dee2bd17f9" + NLsolve = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" + Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.OffsetArrays]] -deps = ["Adapt"] -git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" +git-tree-sha1 = "6a731f2b5c03157418a20c12195eb4b74c8f8621" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.10" +version = "1.13.0" +weakdeps = ["Adapt"] + + [deps.OffsetArrays.extensions] + OffsetArraysAdaptExt = "Adapt" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1556,19 +1621,19 @@ version = "1.3.5+1" [[deps.OneHotArrays]] deps = ["Adapt", "ChainRulesCore", "Compat", "GPUArraysCore", "LinearAlgebra", "NNlib"] -git-tree-sha1 = "5e4029759e8699ec12ebdf8721e51a659443403c" +git-tree-sha1 = "963a3f28a2e65bb87a68033ea4a616002406037d" uuid = "0b1bfda6-eb8a-41d2-88d8-f5af5cad476f" -version = "0.2.4" +version = "0.2.5" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.21+4" +version = "0.3.23+2" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" -version = "0.8.1+0" +version = "0.8.1+2" [[deps.OpenMPI_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] @@ -1601,10 +1666,10 @@ uuid = "47cfafe2-3833-4da3-8183-ce14c2b92cbd" version = "0.1.3" [[deps.Optim]] -deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "01f85d9269b13fedc61e63cc72ee2213565f7a72" +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "47fea72de134f75b105a5d4a1abe5c6aec89d390" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.7.8" +version = "1.9.1" [[deps.Optimisers]] deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] @@ -1624,21 +1689,21 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.6.3" [[deps.OrdinaryDiffEq]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "5f9e7ce227d0e447c3803cc05ef5d8f75f84b9ea" +deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "96ae028da53cdfe24712ab015a6f854cfd7609c0" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.59.3" +version = "6.66.0" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" -version = "10.42.0+0" +version = "10.42.0+1" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "4e5be6bb265d33669f98eb55d2a57addd1eeb72c" +git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.30" +version = "0.11.31" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1654,9 +1719,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates", "PrecompileTools", "UUIDs"] -git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf" +git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.8.0" +version = "2.8.1" [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1672,7 +1737,7 @@ version = "0.42.2+0" [[deps.Pkg]] deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" -version = "1.9.2" +version = "1.10.0" [[deps.PkgVersion]] deps = ["Pkg"] @@ -1688,15 +1753,15 @@ version = "3.1.0" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" +git-tree-sha1 = "862942baf5663da528f66d24996eb6da85218e76" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.5" +version = "1.4.0" [[deps.Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "ccee59c6e48e6f2edf8a5b64dc817b6729f99eb5" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "38a748946dca52a622e79eea6ed35c6737499109" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.39.0" +version = "1.40.0" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1737,10 +1802,10 @@ uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" version = "0.2.4" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] -git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" +deps = ["Adapt", "ArrayInterface", "ForwardDiff"] +git-tree-sha1 = "64bb68f76f789f5fe5930a80af310f19cdafeaed" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.12" +version = "0.4.17" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" @@ -1805,9 +1870,9 @@ version = "6.5.2+2" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" +git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.9.1" +version = "2.9.4" [[deps.QuasiMonteCarlo]] deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] @@ -1830,14 +1895,14 @@ uuid = "a01a1ee8-cea4-48fc-987c-fc7878d79da1" version = "0.10.0" [[deps.Random]] -deps = ["SHA", "Serialization"] +deps = ["SHA"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" +git-tree-sha1 = "c860e84651f58ce240dd79e5d9e055d55234c35a" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.1" +version = "1.6.2" [[deps.RandomNumbers]] deps = ["Random", "Requires"] @@ -1918,9 +1983,9 @@ version = "1.1.1" [[deps.Revise]] deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "Pkg", "REPL", "Requires", "UUIDs", "Unicode"] -git-tree-sha1 = "6990168abf3fe9a6e34ebb0e05aaaddf6572189e" +git-tree-sha1 = "3fe4e5b9cdbb9bbc851c57b149e516acc07f8f72" uuid = "295af30f-e4ad-537b-8983-00126c2a3abe" -version = "3.5.10" +version = "3.5.13" [[deps.Richardson]] deps = ["LinearAlgebra"] @@ -1975,9 +2040,9 @@ version = "0.9.13" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "d432b4c4cc922fb7b21b555c138aa87f9fb7beb8" +git-tree-sha1 = "32ea825941f7b58a6f48268f4b76971ae8eb9eec" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.9.1" +version = "2.10.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -1996,12 +2061,6 @@ version = "2.9.1" RCall = "6f49c342-dc21-5d91-9882-a32aef131414" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" -[[deps.SciMLNLSolve]] -deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "765b788339abd7d983618c09cfc0192e2b6b15fd" -uuid = "e9a6253c-8580-4d32-9898-8661bb511710" -version = "0.1.9" - [[deps.SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] git-tree-sha1 = "51ae235ff058a64815e0a2c34b1db7578a06813d" @@ -2044,14 +2103,18 @@ uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" [[deps.SimpleNonlinearSolve]] -deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "69b1a53374dd14d7c165d98cb646aeb5f36f8d07" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "470c5f97af31fa35926b45eb01e53a46c8d7d35f" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.25" -weakdeps = ["NNlib"] +version = "1.3.1" [deps.SimpleNonlinearSolve.extensions] - SimpleNonlinearSolveNNlibExt = "NNlib" + SimpleNonlinearSolvePolyesterForwardDiffExt = "PolyesterForwardDiff" + SimpleNonlinearSolveStaticArraysExt = "StaticArrays" + + [deps.SimpleNonlinearSolve.weakdeps] + PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -2072,9 +2135,9 @@ version = "2.10.8" [[deps.SnoopCompileCore]] deps = ["Serialization"] -git-tree-sha1 = "3f6ff675f3735ab1904f10f637d2844fa20ed65d" +git-tree-sha1 = "0fc98257d960ec35b9339ca394b93954cfaf5ecd" uuid = "e2b509da-e806-4183-be48-004708413034" -version = "2.10.0" +version = "2.10.1" [[deps.Sobol]] deps = ["DelimitedFiles", "Random"] @@ -2087,35 +2150,38 @@ uuid = "6462fe0b-24de-5631-8697-dd941f90decc" [[deps.SortingAlgorithms]] deps = ["DataStructures"] -git-tree-sha1 = "5165dfb9fd131cf0c6957a3a7605dede376e7b63" +git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085" uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" -version = "1.2.0" +version = "1.2.1" [[deps.SparseArrays]] deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" +version = "1.10.0" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" +git-tree-sha1 = "3b38ae7a1cbe9b8b1344359599753957644b03d4" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.13.0" +version = "2.16.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" + SparseDiffToolsPolyesterForwardDiffExt = "PolyesterForwardDiff" SparseDiffToolsSymbolicsExt = "Symbolics" SparseDiffToolsZygoteExt = "Zygote" [deps.SparseDiffTools.weakdeps] Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SparseInverseSubset]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "91402087fd5d13b2d97e3ef29bbdf9d7859e678a" +git-tree-sha1 = "52962839426b75b3021296f7df242e40ecfc0852" uuid = "dc90abb0-5640-4711-901d-7e5b23a2fada" -version = "0.1.1" +version = "0.1.2" [[deps.Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] @@ -2147,9 +2213,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2158,12 +2224,13 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" +git-tree-sha1 = "7b0e9c14c624e435076d19aea1e5cbdec2b9ca37" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.7.0" -weakdeps = ["Statistics"] +version = "1.9.2" +weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] + StaticArraysChainRulesCoreExt = "ChainRulesCore" StaticArraysStatisticsExt = "Statistics" [[deps.StaticArraysCore]] @@ -2174,7 +2241,7 @@ version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" -version = "1.9.0" +version = "1.10.0" [[deps.StatsAPI]] deps = ["LinearAlgebra"] @@ -2200,10 +2267,10 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"] StatsFunsInverseFunctionsExt = "InverseFunctions" [[deps.StochasticDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "7a71f1e67cbcfcd5387707e6621431d1afff62a9" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "753219de57ac7aab0feb88871d3c51e0eb5e3b03" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.63.2" +version = "6.64.0" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] @@ -2219,18 +2286,18 @@ version = "0.3.7" [[deps.StructArrays]] deps = ["Adapt", "ConstructionBase", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"] -git-tree-sha1 = "0a3db38e4cce3c54fe7a71f831cd7b6194a54213" +git-tree-sha1 = "1b0b1205a56dc288b71b1961d48e351520702e24" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.16" +version = "0.6.17" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse_jll]] -deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +deps = ["Artifacts", "Libdl", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" -version = "5.10.1+6" +version = "7.2.1+1" [[deps.Suppressor]] deps = ["Logging"] @@ -2274,9 +2341,9 @@ version = "1.10.0" [[deps.TaylorSeries]] deps = ["LinearAlgebra", "Markdown", "Requires", "SparseArrays"] -git-tree-sha1 = "62e17af1466940d0c24b207b5bca744ffb27816e" +git-tree-sha1 = "9138fdc8ee4e3b8839eca696a76d15e16c9c7af0" uuid = "6aa5eb33-94cf-58f4-a9d0-e4b2c4fc25ea" -version = "0.15.3" +version = "0.15.4" [deps.TaylorSeries.extensions] TaylorSeriesIAExt = "IntervalArithmetic" @@ -2334,9 +2401,9 @@ weakdeps = ["Random", "Test"] [[deps.Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "ConstructionBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "e579d3c991938fecbb225699e8f611fa3fbf2141" +git-tree-sha1 = "3064e780dbb8a9296ebb3af8f440f787bb5332af" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.79" +version = "0.4.80" [deps.Transducers.extensions] TransducersBlockArraysExt = "BlockArrays" @@ -2352,12 +2419,6 @@ version = "0.4.79" OnlineStatsBase = "925886fa-5bf2-5e8e-b522-a9147a512338" Referenceables = "42d2dcc6-99eb-4e98-b66c-637b7d73030e" -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" - [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] git-tree-sha1 = "fadebab77bf3ae041f77346dd1c290173da5a443" @@ -2401,9 +2462,9 @@ version = "1.3.5" [[deps.TypedSyntax]] deps = ["CodeTracking", "JuliaSyntax"] -git-tree-sha1 = "79ea8a4993ed5d341580c4044433e0259fceb4c6" +git-tree-sha1 = "d07928dd489d9ea2d6527e3acf9cb401f5bf782a" uuid = "d265eb64-f81a-44ad-a842-4247ee1503de" -version = "1.2.3" +version = "1.2.4" [[deps.URIs]] git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b" @@ -2487,9 +2548,9 @@ version = "1.21.0+1" [[deps.Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4528479aa01ee1b3b4cd0e6faef0e04cf16466da" +git-tree-sha1 = "93f43ab61b16ddfb2fd3bb13b3ce241cafb0e6c9" uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.25.0+0" +version = "1.31.0+0" [[deps.WidthLimitedIO]] deps = ["Unicode"] @@ -2499,9 +2560,9 @@ version = "1.0.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "da69178aacc095066bad1f69d2f59a60a1dd8ad1" +git-tree-sha1 = "801cbe47eae69adc50f36c3caec4758d2650741b" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.0+0" +version = "2.12.2+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2668,7 +2729,7 @@ version = "0.4.9" [[deps.Zlib_jll]] deps = ["Libdl"] uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.13+0" +version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2678,9 +2739,9 @@ version = "1.5.5+0" [[deps.Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5ded212acd815612df112bb895ef3910c5a03f57" +git-tree-sha1 = "4ddb4470e47b0094c93055a3bcae799165cc68f1" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.67" +version = "0.6.69" [deps.Zygote.extensions] ZygoteColorsExt = "Colors" @@ -2694,9 +2755,9 @@ version = "0.6.67" [[deps.ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] -git-tree-sha1 = "9d749cd449fb448aeca4feee9a2f4186dbb5d184" +git-tree-sha1 = "27798139afc0a2afa7b1824c206d5e87ea587a00" uuid = "700de1a5-db45-46bc-99cf-38207098b444" -version = "0.2.4" +version = "0.2.5" [[deps.eudev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "gperf_jll"] @@ -2731,7 +2792,7 @@ version = "0.15.1+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" -version = "5.8.0+0" +version = "5.8.0+1" [[deps.libevdev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -2752,10 +2813,10 @@ uuid = "36db933b-70db-51c0-b978-0f229ee0e533" version = "1.18.0+0" [[deps.libpng_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.38+0" +version = "1.6.40+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] @@ -2772,12 +2833,12 @@ version = "1.1.6+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.48.0+0" +version = "1.52.0+1" [[deps.p7zip_jll]] deps = ["Artifacts", "Libdl"] uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" -version = "17.4.0+0" +version = "17.4.0+2" [[deps.x264_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] diff --git a/perf/Manifest.toml b/perf/Manifest.toml index ac9e2bd05..540506409 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -1,13 +1,13 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.9.3" +julia_version = "1.10.0" manifest_format = "2.0" project_hash = "8e15260a1d7a1174a17cdabefa5b5cf04b659913" [[deps.ADTypes]] -git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" +git-tree-sha1 = "41c37aa88889c171f1300ceac1313c06e891d245" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.5" +version = "0.2.6" [[deps.AbstractFFTs]] deps = ["LinearAlgebra"] @@ -27,9 +27,9 @@ version = "0.4.4" [[deps.Accessors]] deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Test"] -git-tree-sha1 = "a7055b939deae2455aa8a67491e034f735dd08d3" +git-tree-sha1 = "cb96992f1bec110ad211b7e410e57ddf7944c16f" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.33" +version = "0.1.35" [deps.Accessors.extensions] AccessorsAxisKeysExt = "AxisKeys" @@ -46,9 +46,9 @@ version = "0.1.33" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "02f731463748db57cc2ebfbd9fbc9ce8280d3433" +git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.1" +version = "3.7.2" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -77,9 +77,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "247efbccf92448be332d154d6ca56b9fcdd93c31" +git-tree-sha1 = "bbec08a37f8722786d87bedf84eae19c020c4efa" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.6.1" +version = "7.7.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -99,9 +99,9 @@ version = "7.6.1" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "af43df5704827c8618afd36eb56fcab20d3041ee" +git-tree-sha1 = "f5c3f5584f14322a0bd73362fd88b589dabd4019" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.4.3" +version = "1.5.3" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -136,9 +136,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" +git-tree-sha1 = "27baf04c642465b4289179f29bb7127f0673d4f1" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.1" +version = "1.4.0" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -146,9 +146,9 @@ weakdeps = ["SparseArrays"] [[deps.BangBang]] deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] -git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" +git-tree-sha1 = "7aa7ad1682f3d5754e3491bb59b8103cae28e3a3" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.39" +version = "0.3.40" [deps.BangBang.extensions] BangBangChainRulesCoreExt = "ChainRulesCore" @@ -174,9 +174,9 @@ version = "0.1.1" [[deps.BenchmarkTools]] deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] -git-tree-sha1 = "d9a9701b899b30332bbcb3e1679c41cce81fb0e8" +git-tree-sha1 = "f1f03a9fa24271160ed7e73051fba3c1a759b53f" uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -version = "1.3.2" +version = "1.4.0" [[deps.BitFlags]] git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" @@ -191,9 +191,9 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "54cd829dd26330c42e1cf9df68470dd4df602c61" +git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.38" +version = "0.16.39" [[deps.BufferedStreams]] git-tree-sha1 = "4ae47f9a4b1dc19897d3743ff13685925c5202ec" @@ -202,14 +202,14 @@ version = "1.2.1" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" +git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.8+0" +version = "1.0.8+1" [[deps.CEnum]] -git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +git-tree-sha1 = "389ad5c84de1ae7cf0e28e381131c98ea87d54fc" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.4.2" +version = "0.5.0" [[deps.CFTime]] deps = ["Dates", "Printf"] @@ -231,9 +231,9 @@ version = "0.2.4" [[deps.CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "Statistics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "76582ae19006b1186e87dadd781747f76cead72c" +git-tree-sha1 = "95ac638373ac40e29c1b6d086a3698f5026ff6a6" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.1.1" +version = "5.1.2" weakdeps = ["ChainRulesCore", "SpecialFunctions"] [deps.CUDA.extensions] @@ -242,15 +242,15 @@ weakdeps = ["ChainRulesCore", "SpecialFunctions"] [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "1e42ef1bdb45487ff28de16182c0df4920181dc3" +git-tree-sha1 = "d01bfc999768f0a31ed36f5d22a76161fc63079c" uuid = "4ee394cb-3365-5eb0-8335-949819d2adfc" -version = "0.7.0+0" +version = "0.7.0+1" [[deps.CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "bcc4a23cbbd99c8535a5318455dcf0f2546ec536" +git-tree-sha1 = "2cb12f6b2209f40a4b8967697689a47c50485490" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.2.2" +version = "0.2.3" [[deps.CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] @@ -272,15 +272,15 @@ version = "0.5.1" [[deps.ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"] -git-tree-sha1 = "006cc7170be3e0fa02ccac6d4164a1eee1fc8c27" +git-tree-sha1 = "213f001d1233fd3b8ef007f50c8cab29061917d8" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.58.0" +version = "1.61.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "e0af648f0692ec1691b5d094b8724ba1346281cf" +git-tree-sha1 = "1287e3872d646eed95198457873249bd9f0caed2" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.18.0" +version = "1.20.1" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -322,11 +322,17 @@ git-tree-sha1 = "c0216e792f518b39b22212127d4a84dc31e4e386" uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2" version = "1.3.5" +[[deps.CodecBzip2]] +deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] +git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" +uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" +version = "0.8.2" + [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "cd67fc487743b2f0fd4380d4cbd3a24660d0eec8" +git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.3" +version = "0.7.4" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] @@ -374,10 +380,10 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[deps.Compat]] -deps = ["UUIDs"] -git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d" +deps = ["TOML", "UUIDs"] +git-tree-sha1 = "75bd5b6fc5089df449b5d35fa501c846c9b6549b" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.10.1" +version = "4.12.0" weakdeps = ["Dates", "LinearAlgebra"] [deps.Compat.extensions] @@ -386,7 +392,7 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.5+0" +version = "1.0.5+1" [[deps.CompositionsBase]] git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" @@ -465,9 +471,9 @@ uuid = "7445602f-e544-4518-8976-18f8e8ae6cdb" version = "0.2.4" [[deps.DataAPI]] -git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" +git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.15.0" +version = "1.16.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "DataStructures", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -477,9 +483,9 @@ version = "1.6.1" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d" +git-tree-sha1 = "ac67408d9ddf207de5cfa9a97e114352430f01ed" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.15" +version = "0.18.16" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -515,9 +521,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "309efb205c30d43b595466283bbecf2769283e22" +git-tree-sha1 = "05b19d9101db42afeb02d1f402d5e9a7986c44f7" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.141.0" +version = "6.145.2" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -545,9 +551,9 @@ version = "6.141.0" [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "57ed4597a309c5b2a10cab5f9813adcb78f92117" +git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.19.0" +version = "5.20.0" [deps.DiffEqNoiseProcess.extensions] DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" @@ -584,9 +590,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "a6c00f894f24460379cb7136633cef54ac9f6f4a" +git-tree-sha1 = "7c302d7a5fec5214eb8a5a4c466dcf7a51fcf169" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.103" +version = "0.25.107" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -626,10 +632,13 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -deps = ["Adapt"] -git-tree-sha1 = "2efe862de93cd87f620ad6ac9c9e3f83f1b2841b" +git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.4" +version = "0.6.5" +weakdeps = ["Adapt"] + + [deps.EnzymeCore.extensions] + AdaptExt = "Adapt" [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -639,9 +648,9 @@ version = "0.0.20230411+0" [[deps.ExceptionUnwrapping]] deps = ["Test"] -git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" +git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" -version = "0.1.9" +version = "0.1.10" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -674,9 +683,9 @@ version = "4.4.2+2" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "b4fbdd20c889804969571cc589900803edda16b7" +git-tree-sha1 = "4820348781ae578893311153d69049a93d05f39d" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.7.1" +version = "1.8.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -709,30 +718,30 @@ version = "0.3.2" [[deps.FastGaussQuadrature]] deps = ["LinearAlgebra", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "93ff6a4d5e7bfe27732259bfabbdd19940d8af1f" +git-tree-sha1 = "fd923962364b645f3719855c88f7074413a6ad92" uuid = "442a2c76-b920-505d-bb47-c5924d526838" -version = "1.0.0" +version = "1.0.2" [[deps.FastLapackInterface]] deps = ["LinearAlgebra"] -git-tree-sha1 = "b12f05108e405dadcc2aff0008db7f831374e051" +git-tree-sha1 = "d576a29bf8bcabf4b1deb9abe88a3d7f78306ab5" uuid = "29a986be-02c6-4525-aec4-84b980013641" -version = "2.0.0" +version = "2.0.1" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" +git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.1" +version = "1.16.2" [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "28e4e9c4b7b162398ec8004bdabe9a90c78c122d" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.8.0" +version = "1.9.3" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -742,9 +751,9 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] -git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" +git-tree-sha1 = "73d1214fec245096717847c62d389a5d2ac86504" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.21.1" +version = "2.22.0" [deps.FiniteDiff.extensions] FiniteDiffBandedMatricesExt = "BandedMatrices" @@ -775,10 +784,10 @@ uuid = "08572546-2f56-4bcf-ba4e-bab62c3a3f89" version = "1.0.0" [[deps.Flux]] -deps = ["Adapt", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "b97c3fc4f3628b8835d83789b09382961a254da4" +deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] +git-tree-sha1 = "39a9e46b4e92d5b56c0712adeb507555a2327240" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.6" +version = "0.14.11" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -854,10 +863,10 @@ deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[deps.GLFW_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] -git-tree-sha1 = "d972031d28c8c8d9d7b41a536ad7bb0c2579caca" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] +git-tree-sha1 = "ff38ba61beff76b8f4acad8ab0c97ef73bb670cb" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.3.8+0" +version = "3.3.9+0" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] @@ -879,15 +888,15 @@ version = "0.25.0" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "27442171f28c952804dede8ff72828a96f2bfc1f" +git-tree-sha1 = "3458564589be207fa6a77dbbf8b97674c9836aab" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.72.10" +version = "0.73.2" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "FreeType2_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "025d171a2847f616becc0f84c8dc62fe18f0f6dd" +git-tree-sha1 = "77f81da2964cc9fa7c0127f941e8bce37f7f1d70" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.72.10+0" +version = "0.73.2+0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -983,9 +992,9 @@ version = "0.3.23" [[deps.IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "8aa91235360659ca7560db43a7d57541120aa31d" +git-tree-sha1 = "5d8c5713f38f7bc029e26627b687710ba406d0dd" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.11" +version = "0.4.12" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -1019,10 +1028,10 @@ uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" version = "0.1.2" [[deps.IntelOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "ad37c091f7d7daf900963171600d7c1c5c3ede32" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "5fdf2fe6724d8caabf43b557b84ce53f3b7e2f6b" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2023.2.0+0" +version = "2024.0.2+0" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -1061,9 +1070,9 @@ version = "1.0.0" [[deps.JET]] deps = ["InteractiveUtils", "JuliaInterpreter", "LoweredCodeUtils", "MacroTools", "Pkg", "PrecompileTools", "Preferences", "Revise", "Test"] -git-tree-sha1 = "e67f79f53406ef949dfcaaf775043ed14aac1cc2" +git-tree-sha1 = "f637cfb8cbfc48c3241db5cf11d150b10686acd1" uuid = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b" -version = "0.8.20" +version = "0.8.27" [[deps.JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -1085,15 +1094,15 @@ version = "0.21.4" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" +git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "2.1.91+0" +version = "3.0.1+0" [[deps.JuliaInterpreter]] deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"] -git-tree-sha1 = "e49bce680c109bc86e3e75ebcb15040d6ad9e1d3" +git-tree-sha1 = "04663b9e1eb0d0eabf76a6d0752e0dac83d53b36" uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a" -version = "0.9.27" +version = "0.9.28" [[deps.JuliaNVTXCallbacks_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1102,9 +1111,9 @@ uuid = "9c1d0b0a-7046-5b2e-a33f-ea22f176ac7e" version = "0.2.1+0" [[deps.JuliaSyntax]] -git-tree-sha1 = "1a4857ab55396b2da745f07f76ce4e696207b740" +git-tree-sha1 = "e00e2b013f3bd98d3789f889b9305c1546ecd1ab" uuid = "70703baa-626e-46a2-a12c-08ffd08c73b4" -version = "0.4.7" +version = "0.4.8" [[deps.JuliaVariables]] deps = ["MLStyle", "NameResolution"] @@ -1113,10 +1122,10 @@ uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" [[deps.JumpProcesses]] -deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "3de1d557e382cad270d921fbc22351f5628e7b1f" +deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"] +git-tree-sha1 = "c451feb97251965a9fe40bacd62551a72cc5902c" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.8.0" +version = "9.10.1" weakdeps = ["FastBroadcast"] [deps.JumpProcesses.extensions] @@ -1130,9 +1139,9 @@ version = "0.4.1" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" +git-tree-sha1 = "4e0cb2f5aad44dcfdc91088e85dee4ecb22c791c" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.13" +version = "0.9.16" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1140,9 +1149,9 @@ weakdeps = ["EnzymeCore"] [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "17e462054b42dcdda73e9a9ba0c67754170c88ae" +git-tree-sha1 = "8a6837ec02fe5fb3def1abc907bb802ef11a0729" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.4" +version = "0.9.5" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1158,9 +1167,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "c879e47398a7ab671c782e02b51a4456794a7fa3" +git-tree-sha1 = "cb4619f7353fc62a1a22ffa3d7ed9791cfb47ad8" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.4.0" +version = "6.4.2" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -1178,10 +1187,10 @@ uuid = "8b046642-f1f6-4319-8d3c-209ddc03c586" version = "1.0.0" [[deps.LLVMOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "f689897ccbe049adb19a065c495e75f372ecd42b" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "d986ce2d884d49126836ea94ed5bfb0f12679713" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "15.0.4+0" +version = "15.0.7+0" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1231,6 +1240,16 @@ git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" version = "0.15.1" +[[deps.LazyArrays]] +deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays"] +git-tree-sha1 = "9cfca23ab83b0dfac93cb1a1ef3331ab9fe596a5" +uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" +version = "1.8.3" +weakdeps = ["StaticArrays"] + + [deps.LazyArrays.extensions] + LazyArraysStaticArraysExt = "StaticArrays" + [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" @@ -1250,21 +1269,26 @@ version = "1.0.0" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" -version = "0.6.3" +version = "0.6.4" [[deps.LibCURL_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" -version = "7.84.0+0" +version = "8.4.0+0" [[deps.LibGit2]] -deps = ["Base64", "NetworkOptions", "Printf", "SHA"] +deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" +[[deps.LibGit2_jll]] +deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"] +uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5" +version = "1.6.4+0" + [[deps.LibSSH2_jll]] deps = ["Artifacts", "Libdl", "MbedTLS_jll"] uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" -version = "1.10.2+0" +version = "1.11.0+1" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -1328,16 +1352,16 @@ deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] -deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "UnPack"] -git-tree-sha1 = "051943b8b8e81c548e9d099d6eb3d3ed23093c35" +deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "6f8e084deabe3189416c4e505b1c53e1b590cae8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.20.0" +version = "2.22.1" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" LinearSolveBlockDiagonalsExt = "BlockDiagonals" LinearSolveCUDAExt = "CUDA" - LinearSolveEnzymeExt = "Enzyme" + LinearSolveEnzymeExt = ["Enzyme", "EnzymeCore"] LinearSolveFastAlmostBandedMatricesExt = ["FastAlmostBandedMatrices"] LinearSolveHYPREExt = "HYPRE" LinearSolveIterativeSolversExt = "IterativeSolvers" @@ -1352,6 +1376,7 @@ version = "2.20.0" BlockDiagonals = "0a1fb500-61f7-11e9-3c65-f5ef3456f9f0" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" FastAlmostBandedMatrices = "9d29842c-ecb8-4973-b1e9-a27b1157504e" HYPRE = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771" IterativeSolvers = "42fd0dbc-a981-5370-80f2-aaf504508153" @@ -1399,15 +1424,15 @@ weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] [[deps.LoweredCodeUtils]] deps = ["JuliaInterpreter"] -git-tree-sha1 = "c165f205e030208760ebd75b5e1f7706761d9218" +git-tree-sha1 = "0b8cf121228f7dae022700c1c11ac1f04122f384" uuid = "6f1432cf-f94c-5a45-995e-cdbf5db27b0b" -version = "2.3.1" +version = "2.3.2" [[deps.MKL_jll]] -deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "eb006abbd7041c28e0d16260e50a24f8f9104913" +deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"] +git-tree-sha1 = "72dc3cf284559eb8f53aa593fe62cb33f83ed0c0" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2023.2.0+0" +version = "2024.0.0+0" [[deps.MLStyle]] git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" @@ -1416,9 +1441,9 @@ version = "0.4.17" [[deps.MLUtils]] deps = ["ChainRulesCore", "Compat", "DataAPI", "DelimitedFiles", "FLoops", "NNlib", "Random", "ShowCases", "SimpleTraits", "Statistics", "StatsBase", "Tables", "Transducers"] -git-tree-sha1 = "3504cdb8c2bc05bde4d4b09a81b01df88fcbbba0" +git-tree-sha1 = "b45738c2e3d0d402dffa32b2c1654759a2ac35a4" uuid = "f1d291b0-491e-4a28-83b9-f70985020b54" -version = "0.4.3" +version = "0.4.4" [[deps.MPI]] deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PkgVersion", "PrecompileTools", "Requires", "Serialization", "Sockets"] @@ -1436,9 +1461,9 @@ version = "0.20.19" [[deps.MPICH_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "8a5b4d2220377d1ece13f49438d71ad20cf1ba83" +git-tree-sha1 = "2ee75365ca243c1a39d467e35ffd3d4d32eef11e" uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4" -version = "4.1.2+0" +version = "4.1.2+1" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] @@ -1448,15 +1473,15 @@ version = "0.1.10" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "6979eccb6a9edbbb62681e158443e79ecc0d056a" +git-tree-sha1 = "8eeb3c73bbc0ca203d0dc8dad4008350bbe5797b" uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748" -version = "5.3.1+0" +version = "5.3.1+1" [[deps.MacroTools]] deps = ["Markdown", "Random"] -git-tree-sha1 = "9ee1618cbf5240e6d4e0371d6f24065083f60c48" +git-tree-sha1 = "2fa9ee3e63fd3a4f7a9a4f4744a52f4856de82df" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.11" +version = "0.5.13" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1467,6 +1492,24 @@ version = "0.1.8" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" +[[deps.MathOptInterface]] +deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] +git-tree-sha1 = "8b40681684df46785a0012d352982e22ac3be59e" +uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" +version = "1.25.2" + +[[deps.MatrixFactorizations]] +deps = ["ArrayLayouts", "LinearAlgebra", "Printf", "Random"] +git-tree-sha1 = "78f6e33434939b0ac9ba1df81e6d005ee85a7396" +uuid = "a3b82374-2e81-5b9e-98ce-41277c0e4c87" +version = "2.1.0" + +[[deps.MaybeInplace]] +deps = ["ArrayInterface", "LinearAlgebra", "MacroTools", "SparseArrays"] +git-tree-sha1 = "a85c6a98c9e5a2a7046bc1bb89f28a3241e1de4d" +uuid = "bb5d69b7-63fc-4a16-80bd-7e42200c7bdb" +version = "0.1.1" + [[deps.MbedTLS]] deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf" @@ -1476,7 +1519,7 @@ version = "1.1.9" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" -version = "2.28.2+0" +version = "2.28.2+1" [[deps.Measures]] git-tree-sha1 = "c13304c81eec1ed3af7fc20e75fb6b26092a1102" @@ -1506,13 +1549,19 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" -version = "2022.10.11" +version = "2023.1.10" [[deps.MuladdMacro]] git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.4" +[[deps.MutableArithmetics]] +deps = ["LinearAlgebra", "SparseArrays", "Test"] +git-tree-sha1 = "806eea990fb41f9b36f1253e5697aa645bf6a9f8" +uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" +version = "1.4.0" + [[deps.NCDatasets]] deps = ["CFTime", "CommonDataModel", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"] git-tree-sha1 = "4263c4220f22e20729329838bf7e94a49d1ac32f" @@ -1533,9 +1582,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "ac86d2944bf7a670ac8bf0f7ec099b5898abcc09" +git-tree-sha1 = "d2811b435d2f571bdfdfa644bb806a66b458e186" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.8" +version = "0.9.11" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1551,9 +1600,9 @@ version = "0.9.8" [[deps.NVTX]] deps = ["Colors", "JuliaNVTXCallbacks_jll", "Libdl", "NVTX_jll"] -git-tree-sha1 = "8bc9ce4233be3c63f8dcd78ccaf1b63a9c0baa34" +git-tree-sha1 = "53046f0483375e3ed78e49190f1154fa0a4083a1" uuid = "5da4648a-3479-48b8-97b9-01cb529c0a1f" -version = "0.3.3" +version = "0.3.4" [[deps.NVTX_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1584,26 +1633,37 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "6166ccd8f79c93c636ca61ab4cd18f555932563d" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "767100434dc775c993082e70e453ba7bd9866afa" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.8.2" +version = "3.1.0" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" NonlinearSolveLeastSquaresOptimExt = "LeastSquaresOptim" + NonlinearSolveMINPACKExt = "MINPACK" + NonlinearSolveNLsolveExt = "NLsolve" + NonlinearSolveSymbolicsExt = "Symbolics" + NonlinearSolveZygoteExt = "Zygote" [deps.NonlinearSolve.weakdeps] BandedMatrices = "aae01518-5342-5314-be14-df237901396f" FastLevenbergMarquardt = "7a0df574-e128-4d35-8cbd-3d84502bf7ce" LeastSquaresOptim = "0fc2ff8b-aaa3-5acd-a817-1944a5e08891" + MINPACK = "4854310b-de5a-5eb6-a2a5-c1dee2bd17f9" + NLsolve = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" + Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.OffsetArrays]] -deps = ["Adapt"] -git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" +git-tree-sha1 = "6a731f2b5c03157418a20c12195eb4b74c8f8621" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.10" +version = "1.13.0" +weakdeps = ["Adapt"] + + [deps.OffsetArrays.extensions] + OffsetArraysAdaptExt = "Adapt" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1613,19 +1673,19 @@ version = "1.3.5+1" [[deps.OneHotArrays]] deps = ["Adapt", "ChainRulesCore", "Compat", "GPUArraysCore", "LinearAlgebra", "NNlib"] -git-tree-sha1 = "5e4029759e8699ec12ebdf8721e51a659443403c" +git-tree-sha1 = "963a3f28a2e65bb87a68033ea4a616002406037d" uuid = "0b1bfda6-eb8a-41d2-88d8-f5af5cad476f" -version = "0.2.4" +version = "0.2.5" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.21+4" +version = "0.3.23+2" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" -version = "0.8.1+0" +version = "0.8.1+2" [[deps.OpenMPI_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] @@ -1658,10 +1718,10 @@ uuid = "47cfafe2-3833-4da3-8183-ce14c2b92cbd" version = "0.1.3" [[deps.Optim]] -deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "01f85d9269b13fedc61e63cc72ee2213565f7a72" +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "47fea72de134f75b105a5d4a1abe5c6aec89d390" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.7.8" +version = "1.9.1" [[deps.Optimisers]] deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] @@ -1681,21 +1741,21 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.6.3" [[deps.OrdinaryDiffEq]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "5f9e7ce227d0e447c3803cc05ef5d8f75f84b9ea" +deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "96ae028da53cdfe24712ab015a6f854cfd7609c0" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.59.3" +version = "6.66.0" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" -version = "10.42.0+0" +version = "10.42.0+1" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "4e5be6bb265d33669f98eb55d2a57addd1eeb72c" +git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.30" +version = "0.11.31" [[deps.PProf]] deps = ["AbstractTrees", "EnumX", "FlameGraphs", "Libdl", "OrderedCollections", "Profile", "ProgressMeter", "ProtoBuf", "pprof_jll"] @@ -1723,9 +1783,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates", "PrecompileTools", "UUIDs"] -git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf" +git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.8.0" +version = "2.8.1" [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1741,7 +1801,7 @@ version = "0.42.2+0" [[deps.Pkg]] deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" -version = "1.9.2" +version = "1.10.0" [[deps.PkgVersion]] deps = ["Pkg"] @@ -1757,15 +1817,15 @@ version = "3.1.0" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" +git-tree-sha1 = "862942baf5663da528f66d24996eb6da85218e76" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.5" +version = "1.4.0" [[deps.Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "ccee59c6e48e6f2edf8a5b64dc817b6729f99eb5" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "38a748946dca52a622e79eea6ed35c6737499109" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.39.0" +version = "1.40.0" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1812,10 +1872,10 @@ uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" version = "0.2.4" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] -git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" +deps = ["Adapt", "ArrayInterface", "ForwardDiff"] +git-tree-sha1 = "64bb68f76f789f5fe5930a80af310f19cdafeaed" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.12" +version = "0.4.17" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" @@ -1886,9 +1946,9 @@ version = "1.9.0" [[deps.ProtoBuf]] deps = ["BufferedStreams", "Dates", "EnumX", "TOML", "TranscodingStreams"] -git-tree-sha1 = "dc85dc33abde04b3c2f687834a5551994b27c328" +git-tree-sha1 = "f2bfddd629ba7a53ed789d6427d64e0e4c378ef8" uuid = "3349acd9-ac6a-5e09-bcdb-63829b23a429" -version = "1.0.14" +version = "1.0.15" [[deps.Qt6Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Vulkan_Loader_jll", "Xorg_libSM_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_cursor_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "libinput_jll", "xkbcommon_jll"] @@ -1898,9 +1958,9 @@ version = "6.5.2+2" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" +git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.9.1" +version = "2.9.4" [[deps.QuasiMonteCarlo]] deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] @@ -1917,14 +1977,14 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" [[deps.Random]] -deps = ["SHA", "Serialization"] +deps = ["SHA"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" +git-tree-sha1 = "c860e84651f58ce240dd79e5d9e055d55234c35a" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.1" +version = "1.6.2" [[deps.RandomNumbers]] deps = ["Random", "Requires"] @@ -2005,9 +2065,9 @@ version = "1.1.1" [[deps.Revise]] deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "Pkg", "REPL", "Requires", "UUIDs", "Unicode"] -git-tree-sha1 = "6990168abf3fe9a6e34ebb0e05aaaddf6572189e" +git-tree-sha1 = "3fe4e5b9cdbb9bbc851c57b149e516acc07f8f72" uuid = "295af30f-e4ad-537b-8983-00126c2a3abe" -version = "3.5.10" +version = "3.5.13" [[deps.Richardson]] deps = ["LinearAlgebra"] @@ -2062,9 +2122,9 @@ version = "0.9.13" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "d432b4c4cc922fb7b21b555c138aa87f9fb7beb8" +git-tree-sha1 = "32ea825941f7b58a6f48268f4b76971ae8eb9eec" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.9.1" +version = "2.10.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2083,12 +2143,6 @@ version = "2.9.1" RCall = "6f49c342-dc21-5d91-9882-a32aef131414" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" -[[deps.SciMLNLSolve]] -deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "765b788339abd7d983618c09cfc0192e2b6b15fd" -uuid = "e9a6253c-8580-4d32-9898-8661bb511710" -version = "0.1.9" - [[deps.SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] git-tree-sha1 = "51ae235ff058a64815e0a2c34b1db7578a06813d" @@ -2137,14 +2191,18 @@ uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" [[deps.SimpleNonlinearSolve]] -deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "69b1a53374dd14d7c165d98cb646aeb5f36f8d07" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "470c5f97af31fa35926b45eb01e53a46c8d7d35f" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.25" -weakdeps = ["NNlib"] +version = "1.3.1" [deps.SimpleNonlinearSolve.extensions] - SimpleNonlinearSolveNNlibExt = "NNlib" + SimpleNonlinearSolvePolyesterForwardDiffExt = "PolyesterForwardDiff" + SimpleNonlinearSolveStaticArraysExt = "StaticArrays" + + [deps.SimpleNonlinearSolve.weakdeps] + PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -2165,9 +2223,9 @@ version = "2.10.8" [[deps.SnoopCompileCore]] deps = ["Serialization"] -git-tree-sha1 = "3f6ff675f3735ab1904f10f637d2844fa20ed65d" +git-tree-sha1 = "0fc98257d960ec35b9339ca394b93954cfaf5ecd" uuid = "e2b509da-e806-4183-be48-004708413034" -version = "2.10.0" +version = "2.10.1" [[deps.Sobol]] deps = ["DelimitedFiles", "Random"] @@ -2180,35 +2238,38 @@ uuid = "6462fe0b-24de-5631-8697-dd941f90decc" [[deps.SortingAlgorithms]] deps = ["DataStructures"] -git-tree-sha1 = "5165dfb9fd131cf0c6957a3a7605dede376e7b63" +git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085" uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" -version = "1.2.0" +version = "1.2.1" [[deps.SparseArrays]] deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" +version = "1.10.0" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" +git-tree-sha1 = "3b38ae7a1cbe9b8b1344359599753957644b03d4" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.13.0" +version = "2.16.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" + SparseDiffToolsPolyesterForwardDiffExt = "PolyesterForwardDiff" SparseDiffToolsSymbolicsExt = "Symbolics" SparseDiffToolsZygoteExt = "Zygote" [deps.SparseDiffTools.weakdeps] Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SparseInverseSubset]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "91402087fd5d13b2d97e3ef29bbdf9d7859e678a" +git-tree-sha1 = "52962839426b75b3021296f7df242e40ecfc0852" uuid = "dc90abb0-5640-4711-901d-7e5b23a2fada" -version = "0.1.1" +version = "0.1.2" [[deps.Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] @@ -2240,9 +2301,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2251,12 +2312,13 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" +git-tree-sha1 = "7b0e9c14c624e435076d19aea1e5cbdec2b9ca37" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.7.0" -weakdeps = ["Statistics"] +version = "1.9.2" +weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] + StaticArraysChainRulesCoreExt = "ChainRulesCore" StaticArraysStatisticsExt = "Statistics" [[deps.StaticArraysCore]] @@ -2267,7 +2329,7 @@ version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" -version = "1.9.0" +version = "1.10.0" [[deps.StatsAPI]] deps = ["LinearAlgebra"] @@ -2293,10 +2355,10 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"] StatsFunsInverseFunctionsExt = "InverseFunctions" [[deps.StochasticDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "7a71f1e67cbcfcd5387707e6621431d1afff62a9" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "753219de57ac7aab0feb88871d3c51e0eb5e3b03" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.63.2" +version = "6.64.0" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] @@ -2318,18 +2380,18 @@ version = "0.3.4" [[deps.StructArrays]] deps = ["Adapt", "ConstructionBase", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"] -git-tree-sha1 = "0a3db38e4cce3c54fe7a71f831cd7b6194a54213" +git-tree-sha1 = "1b0b1205a56dc288b71b1961d48e351520702e24" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.16" +version = "0.6.17" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse_jll]] -deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +deps = ["Artifacts", "Libdl", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" -version = "5.10.1+6" +version = "7.2.1+1" [[deps.Suppressor]] deps = ["Logging"] @@ -2373,9 +2435,9 @@ version = "1.10.0" [[deps.TaylorSeries]] deps = ["LinearAlgebra", "Markdown", "Requires", "SparseArrays"] -git-tree-sha1 = "62e17af1466940d0c24b207b5bca744ffb27816e" +git-tree-sha1 = "9138fdc8ee4e3b8839eca696a76d15e16c9c7af0" uuid = "6aa5eb33-94cf-58f4-a9d0-e4b2c4fc25ea" -version = "0.15.3" +version = "0.15.4" [deps.TaylorSeries.extensions] TaylorSeriesIAExt = "IntervalArithmetic" @@ -2423,16 +2485,19 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.23" [[deps.TranscodingStreams]] -deps = ["Random", "Test"] -git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" +git-tree-sha1 = "1fbeaaca45801b4ba17c251dd8603ef24801dd84" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.13" +version = "0.10.2" +weakdeps = ["Random", "Test"] + + [deps.TranscodingStreams.extensions] + TestExt = ["Test", "Random"] [[deps.Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "ConstructionBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "e579d3c991938fecbb225699e8f611fa3fbf2141" +git-tree-sha1 = "3064e780dbb8a9296ebb3af8f440f787bb5332af" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.79" +version = "0.4.80" [deps.Transducers.extensions] TransducersBlockArraysExt = "BlockArrays" @@ -2448,12 +2513,6 @@ version = "0.4.79" OnlineStatsBase = "925886fa-5bf2-5e8e-b522-a9147a512338" Referenceables = "42d2dcc6-99eb-4e98-b66c-637b7d73030e" -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" - [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] git-tree-sha1 = "fadebab77bf3ae041f77346dd1c290173da5a443" @@ -2497,9 +2556,9 @@ version = "1.3.5" [[deps.TypedSyntax]] deps = ["CodeTracking", "JuliaSyntax"] -git-tree-sha1 = "79ea8a4993ed5d341580c4044433e0259fceb4c6" +git-tree-sha1 = "d07928dd489d9ea2d6527e3acf9cb401f5bf782a" uuid = "d265eb64-f81a-44ad-a842-4247ee1503de" -version = "1.2.3" +version = "1.2.4" [[deps.URIs]] git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b" @@ -2583,9 +2642,9 @@ version = "1.21.0+1" [[deps.Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4528479aa01ee1b3b4cd0e6faef0e04cf16466da" +git-tree-sha1 = "93f43ab61b16ddfb2fd3bb13b3ce241cafb0e6c9" uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.25.0+0" +version = "1.31.0+0" [[deps.WidthLimitedIO]] deps = ["Unicode"] @@ -2595,9 +2654,9 @@ version = "1.0.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "da69178aacc095066bad1f69d2f59a60a1dd8ad1" +git-tree-sha1 = "801cbe47eae69adc50f36c3caec4758d2650741b" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.0+0" +version = "2.12.2+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2764,7 +2823,7 @@ version = "0.4.9" [[deps.Zlib_jll]] deps = ["Libdl"] uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.13+0" +version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2774,9 +2833,9 @@ version = "1.5.5+0" [[deps.Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5ded212acd815612df112bb895ef3910c5a03f57" +git-tree-sha1 = "4ddb4470e47b0094c93055a3bcae799165cc68f1" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.67" +version = "0.6.69" [deps.Zygote.extensions] ZygoteColorsExt = "Colors" @@ -2790,9 +2849,9 @@ version = "0.6.67" [[deps.ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] -git-tree-sha1 = "9d749cd449fb448aeca4feee9a2f4186dbb5d184" +git-tree-sha1 = "27798139afc0a2afa7b1824c206d5e87ea587a00" uuid = "700de1a5-db45-46bc-99cf-38207098b444" -version = "0.2.4" +version = "0.2.5" [[deps.eudev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "gperf_jll"] @@ -2827,7 +2886,7 @@ version = "0.15.1+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" -version = "5.8.0+0" +version = "5.8.0+1" [[deps.libevdev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -2848,10 +2907,10 @@ uuid = "36db933b-70db-51c0-b978-0f229ee0e533" version = "1.18.0+0" [[deps.libpng_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.38+0" +version = "1.6.40+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] @@ -2868,12 +2927,12 @@ version = "1.1.6+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.48.0+0" +version = "1.52.0+1" [[deps.p7zip_jll]] deps = ["Artifacts", "Libdl"] uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" -version = "17.4.0+0" +version = "17.4.0+2" [[deps.pprof_jll]] deps = ["Artifacts", "Graphviz_jll", "JLLWrappers", "Libdl", "Pkg"] diff --git a/post_processing/mse_tables.jl b/post_processing/mse_tables.jl index c0ff77b88..4a211e4a8 100644 --- a/post_processing/mse_tables.jl +++ b/post_processing/mse_tables.jl @@ -5,100 +5,100 @@ all_best_mse = OrderedCollections.OrderedDict() # all_best_mse["ARM_SGP"] = OrderedCollections.OrderedDict() -all_best_mse["ARM_SGP"]["qt_mean"] = 0.29076673178995216 -all_best_mse["ARM_SGP"]["updraft_area"] = 330.984813969893 -all_best_mse["ARM_SGP"]["updraft_w"] = 147.24652157952917 -all_best_mse["ARM_SGP"]["updraft_qt"] = 29.164231737860703 +all_best_mse["ARM_SGP"]["qt_mean"] = 0.2907667317899455 +all_best_mse["ARM_SGP"]["updraft_area"] = 330.9848139698947 +all_best_mse["ARM_SGP"]["updraft_w"] = 147.2465215795317 +all_best_mse["ARM_SGP"]["updraft_qt"] = 29.16423173786067 all_best_mse["ARM_SGP"]["updraft_thetal"] = 172.00836919579936 all_best_mse["ARM_SGP"]["u_mean"] = 1.3235797273549681e-5 -all_best_mse["ARM_SGP"]["tke_mean"] = 1071.1115837851398 -all_best_mse["ARM_SGP"]["temperature_mean"] = 0.000145284205847849 -all_best_mse["ARM_SGP"]["ql_mean"] = 191.43313382586433 +all_best_mse["ARM_SGP"]["tke_mean"] = 1071.1115837851423 +all_best_mse["ARM_SGP"]["temperature_mean"] = 0.00014528420584784352 +all_best_mse["ARM_SGP"]["ql_mean"] = 191.43313382584745 all_best_mse["ARM_SGP"]["qi_mean"] = "NA" -all_best_mse["ARM_SGP"]["thetal_mean"] = 0.00013400187653103297 -all_best_mse["ARM_SGP"]["Hvar_mean"] = 464.6765528832271 -all_best_mse["ARM_SGP"]["QTvar_mean"] = 187.56407976591296 +all_best_mse["ARM_SGP"]["thetal_mean"] = 0.0001340018765310288 +all_best_mse["ARM_SGP"]["Hvar_mean"] = 464.6765528832545 +all_best_mse["ARM_SGP"]["QTvar_mean"] = 187.56407976592376 # all_best_mse["Bomex"] = OrderedCollections.OrderedDict() -all_best_mse["Bomex"]["qt_mean"] = 0.09011341001015058 -all_best_mse["Bomex"]["updraft_area"] = 128.11120831307056 -all_best_mse["Bomex"]["updraft_w"] = 15.071877299719867 -all_best_mse["Bomex"]["updraft_qt"] = 6.880009558381172 -all_best_mse["Bomex"]["updraft_thetal"] = 69.78077555044864 -all_best_mse["Bomex"]["v_mean"] = 65.48877768586455 -all_best_mse["Bomex"]["u_mean"] = 0.26993515144140345 -all_best_mse["Bomex"]["tke_mean"] = 70.2632736760826 -all_best_mse["Bomex"]["temperature_mean"] = 3.2721342748183155e-5 -all_best_mse["Bomex"]["ql_mean"] = 7.5634994360906225 +all_best_mse["Bomex"]["qt_mean"] = 0.09011341000754008 +all_best_mse["Bomex"]["updraft_area"] = 128.11120830996632 +all_best_mse["Bomex"]["updraft_w"] = 15.071878677078109 +all_best_mse["Bomex"]["updraft_qt"] = 6.880009558624731 +all_best_mse["Bomex"]["updraft_thetal"] = 69.78077555043802 +all_best_mse["Bomex"]["v_mean"] = 65.488777685903 +all_best_mse["Bomex"]["u_mean"] = 0.2699351514392582 +all_best_mse["Bomex"]["tke_mean"] = 70.26327370948906 +all_best_mse["Bomex"]["temperature_mean"] = 3.272134272978319e-5 +all_best_mse["Bomex"]["ql_mean"] = 7.563500080998378 all_best_mse["Bomex"]["qi_mean"] = "NA" -all_best_mse["Bomex"]["thetal_mean"] = 3.33221329251271e-5 -all_best_mse["Bomex"]["Hvar_mean"] = 5256.502176612955 -all_best_mse["Bomex"]["QTvar_mean"] = 1819.1486275444367 +all_best_mse["Bomex"]["thetal_mean"] = 3.332213292826876e-5 +all_best_mse["Bomex"]["Hvar_mean"] = 5256.509293699336 +all_best_mse["Bomex"]["QTvar_mean"] = 1819.1511178925962 # all_best_mse["DryBubble"] = OrderedCollections.OrderedDict() -all_best_mse["DryBubble"]["updraft_area"] = 193.75911462032647 -all_best_mse["DryBubble"]["updraft_w"] = 1222.4535227571926 -all_best_mse["DryBubble"]["updraft_thetal"] = 4.82595176836427e-5 -all_best_mse["DryBubble"]["u_mean"] = 0.0002439086451975369 -all_best_mse["DryBubble"]["tke_mean"] = 35499.24049194259 -all_best_mse["DryBubble"]["temperature_mean"] = 1.6369287103293815e-5 -all_best_mse["DryBubble"]["thetal_mean"] = 1.439036815409058e-5 -all_best_mse["DryBubble"]["Hvar_mean"] = 8082.579936607187 +all_best_mse["DryBubble"]["updraft_area"] = 662.491552933427 +all_best_mse["DryBubble"]["updraft_w"] = 77.58704694579805 +all_best_mse["DryBubble"]["updraft_thetal"] = 3.0630215077488374e-5 +all_best_mse["DryBubble"]["u_mean"] = 1.0788090209212282 +all_best_mse["DryBubble"]["tke_mean"] = 127.05632647204375 +all_best_mse["DryBubble"]["temperature_mean"] = 2.126813780246733e-5 +all_best_mse["DryBubble"]["thetal_mean"] = 1.938857275143114e-5 +all_best_mse["DryBubble"]["Hvar_mean"] = 121.32453889326246 # all_best_mse["DYCOMS_RF01"] = OrderedCollections.OrderedDict() -all_best_mse["DYCOMS_RF01"]["qt_mean"] = 0.03219020337215431 -all_best_mse["DYCOMS_RF01"]["ql_mean"] = 34.90616805309427 -all_best_mse["DYCOMS_RF01"]["updraft_area"] = 29.853966612468575 -all_best_mse["DYCOMS_RF01"]["updraft_w"] = 6.102139340266054 -all_best_mse["DYCOMS_RF01"]["updraft_qt"] = 1.8860814628700717 -all_best_mse["DYCOMS_RF01"]["updraft_thetal"] = 46.18765704475976 -all_best_mse["DYCOMS_RF01"]["v_mean"] = 0.010463555165664547 -all_best_mse["DYCOMS_RF01"]["u_mean"] = 0.10329852122057932 -all_best_mse["DYCOMS_RF01"]["tke_mean"] = 17.105518846534395 -all_best_mse["DYCOMS_RF01"]["temperature_mean"] = 0.0001000176747758382 -all_best_mse["DYCOMS_RF01"]["thetal_mean"] = 9.923984901176976e-5 -all_best_mse["DYCOMS_RF01"]["Hvar_mean"] = 1280.408036883615 -all_best_mse["DYCOMS_RF01"]["QTvar_mean"] = 514.493100959033 +all_best_mse["DYCOMS_RF01"]["qt_mean"] = 0.03219019115446605 +all_best_mse["DYCOMS_RF01"]["ql_mean"] = 34.906112788163014 +all_best_mse["DYCOMS_RF01"]["updraft_area"] = 29.853966457614735 +all_best_mse["DYCOMS_RF01"]["updraft_w"] = 6.102138835730274 +all_best_mse["DYCOMS_RF01"]["updraft_qt"] = 1.886081460955358 +all_best_mse["DYCOMS_RF01"]["updraft_thetal"] = 46.1876570447666 +all_best_mse["DYCOMS_RF01"]["v_mean"] = 0.010463546721693659 +all_best_mse["DYCOMS_RF01"]["u_mean"] = 0.10329850778080657 +all_best_mse["DYCOMS_RF01"]["tke_mean"] = 17.10552071754598 +all_best_mse["DYCOMS_RF01"]["temperature_mean"] = 0.00010001767445736667 +all_best_mse["DYCOMS_RF01"]["thetal_mean"] = 9.92398495424897e-5 +all_best_mse["DYCOMS_RF01"]["Hvar_mean"] = 1280.4080371310502 +all_best_mse["DYCOMS_RF01"]["QTvar_mean"] = 514.4930850317071 # all_best_mse["DYCOMS_RF02"] = OrderedCollections.OrderedDict() -all_best_mse["DYCOMS_RF02"]["qt_mean"] = 0.05242881589199175 -all_best_mse["DYCOMS_RF02"]["ql_mean"] = 7.1954552121017885 -all_best_mse["DYCOMS_RF02"]["qr_mean"] = 21.140592728847118 -all_best_mse["DYCOMS_RF02"]["updraft_area"] = 28.648700307033906 -all_best_mse["DYCOMS_RF02"]["updraft_w"] = 9.102157759959661 -all_best_mse["DYCOMS_RF02"]["updraft_qt"] = 4.677162503059372 -all_best_mse["DYCOMS_RF02"]["updraft_thetal"] = 40.54508942465268 -all_best_mse["DYCOMS_RF02"]["v_mean"] = 43.29499782280301 -all_best_mse["DYCOMS_RF02"]["u_mean"] = 19.893374629727017 -all_best_mse["DYCOMS_RF02"]["tke_mean"] = 14.089722969784196 -all_best_mse["DYCOMS_RF02"]["temperature_mean"] = 2.4808639216725863e-5 -all_best_mse["DYCOMS_RF02"]["thetal_mean"] = 1.9854090822300147e-5 -all_best_mse["DYCOMS_RF02"]["Hvar_mean"] = 1259.1163139965176 -all_best_mse["DYCOMS_RF02"]["QTvar_mean"] = 342.95732990596997 +all_best_mse["DYCOMS_RF02"]["qt_mean"] = 0.05243073226387128 +all_best_mse["DYCOMS_RF02"]["ql_mean"] = 7.194173324715564 +all_best_mse["DYCOMS_RF02"]["qr_mean"] = 21.140976848369945 +all_best_mse["DYCOMS_RF02"]["updraft_area"] = 28.648810732346178 +all_best_mse["DYCOMS_RF02"]["updraft_w"] = 9.101994198343215 +all_best_mse["DYCOMS_RF02"]["updraft_qt"] = 4.6771707459500504 +all_best_mse["DYCOMS_RF02"]["updraft_thetal"] = 40.54508943744489 +all_best_mse["DYCOMS_RF02"]["v_mean"] = 43.294988939141255 +all_best_mse["DYCOMS_RF02"]["u_mean"] = 19.893372020438 +all_best_mse["DYCOMS_RF02"]["tke_mean"] = 14.097629703925877 +all_best_mse["DYCOMS_RF02"]["temperature_mean"] = 2.480811854028201e-5 +all_best_mse["DYCOMS_RF02"]["thetal_mean"] = 1.9853476024554628e-5 +all_best_mse["DYCOMS_RF02"]["Hvar_mean"] = 1259.0945035065918 +all_best_mse["DYCOMS_RF02"]["QTvar_mean"] = 342.9228638299818 # all_best_mse["GABLS"] = OrderedCollections.OrderedDict() -all_best_mse["GABLS"]["updraft_thetal"] = 5.0057325456092485e-8 -all_best_mse["GABLS"]["v_mean"] = 0.005407072149739587 -all_best_mse["GABLS"]["u_mean"] = 0.000308425139051942 -all_best_mse["GABLS"]["tke_mean"] = 0.01232102240971516 -all_best_mse["GABLS"]["temperature_mean"] = 5.007168935021533e-8 -all_best_mse["GABLS"]["thetal_mean"] = 5.0057325456092485e-8 -all_best_mse["GABLS"]["Hvar_mean"] = 0.09340414179438572 +all_best_mse["GABLS"]["updraft_thetal"] = 1.7603509412237138e-6 +all_best_mse["GABLS"]["v_mean"] = 0.4523140294810419 +all_best_mse["GABLS"]["u_mean"] = 0.07664984140613641 +all_best_mse["GABLS"]["tke_mean"] = 2.2106566145474353 +all_best_mse["GABLS"]["temperature_mean"] = 1.7594116314766504e-6 +all_best_mse["GABLS"]["thetal_mean"] = 1.7526722150380198e-6 +all_best_mse["GABLS"]["Hvar_mean"] = 1.3947303659683419 # all_best_mse["life_cycle_Tan2018"] = OrderedCollections.OrderedDict() -all_best_mse["life_cycle_Tan2018"]["qt_mean"] = 0.020171806854823088 -all_best_mse["life_cycle_Tan2018"]["ql_mean"] = 16.55376904476486 -all_best_mse["life_cycle_Tan2018"]["updraft_area"] = 4.045935338129409 -all_best_mse["life_cycle_Tan2018"]["updraft_w"] = 4.033393062729022 -all_best_mse["life_cycle_Tan2018"]["updraft_qt"] = 0.06312055546212496 -all_best_mse["life_cycle_Tan2018"]["updraft_thetal"] = 3.5567317572989377e-5 -all_best_mse["life_cycle_Tan2018"]["v_mean"] = 0.10255562921273272 -all_best_mse["life_cycle_Tan2018"]["u_mean"] = 0.00030063658835013224 -all_best_mse["life_cycle_Tan2018"]["tke_mean"] = 0.12558848426117689 -all_best_mse["life_cycle_Tan2018"]["temperature_mean"] = 9.226065845501585e-6 -all_best_mse["life_cycle_Tan2018"]["thetal_mean"] = 9.666638291720499e-6 -all_best_mse["life_cycle_Tan2018"]["Hvar_mean"] = 148.89166182594923 -all_best_mse["life_cycle_Tan2018"]["QTvar_mean"] = 67.6929850413386 +all_best_mse["life_cycle_Tan2018"]["qt_mean"] = 0.00405777644451526 +all_best_mse["life_cycle_Tan2018"]["ql_mean"] = 2.722361754644556 +all_best_mse["life_cycle_Tan2018"]["updraft_area"] = 0.8048016099553696 +all_best_mse["life_cycle_Tan2018"]["updraft_w"] = 2.8931916861105518 +all_best_mse["life_cycle_Tan2018"]["updraft_qt"] = 0.0424768319887559 +all_best_mse["life_cycle_Tan2018"]["updraft_thetal"] = 2.2460104419535327e-5 +all_best_mse["life_cycle_Tan2018"]["v_mean"] = 0.5768400847672248 +all_best_mse["life_cycle_Tan2018"]["u_mean"] = 0.003213704169654869 +all_best_mse["life_cycle_Tan2018"]["tke_mean"] = 0.45386605467374724 +all_best_mse["life_cycle_Tan2018"]["temperature_mean"] = 2.431733977714374e-6 +all_best_mse["life_cycle_Tan2018"]["thetal_mean"] = 1.9457520412812074e-6 +all_best_mse["life_cycle_Tan2018"]["Hvar_mean"] = 5.4936772799767954 +all_best_mse["life_cycle_Tan2018"]["QTvar_mean"] = 6.592287685875095 # all_best_mse["Nieuwstadt"] = OrderedCollections.OrderedDict() all_best_mse["Nieuwstadt"]["updraft_area"] = 112.10957975882653 @@ -111,21 +111,21 @@ all_best_mse["Nieuwstadt"]["thetal_mean"] = 1.1197150405915735e-5 all_best_mse["Nieuwstadt"]["Hvar_mean"] = 719.9710717939784 # all_best_mse["Rico"] = OrderedCollections.OrderedDict() -all_best_mse["Rico"]["qt_mean"] = 0.8915568529497633 -all_best_mse["Rico"]["updraft_area"] = 482.7071788979082 -all_best_mse["Rico"]["updraft_w"] = 45.699277721275664 -all_best_mse["Rico"]["updraft_qt"] = 13.984219462606 -all_best_mse["Rico"]["updraft_thetal"] = 133.86163327416165 -all_best_mse["Rico"]["v_mean"] = 0.6974206687894534 -all_best_mse["Rico"]["u_mean"] = 0.37189477593429493 -all_best_mse["Rico"]["tke_mean"] = 160.79024884653123 -all_best_mse["Rico"]["temperature_mean"] = 0.0005293027359347022 -all_best_mse["Rico"]["ql_mean"] = 75.08746656949579 +all_best_mse["Rico"]["qt_mean"] = 0.8915568529484567 +all_best_mse["Rico"]["updraft_area"] = 482.70717889790933 +all_best_mse["Rico"]["updraft_w"] = 45.69927772081677 +all_best_mse["Rico"]["updraft_qt"] = 13.984219462605015 +all_best_mse["Rico"]["updraft_thetal"] = 133.86163327416162 +all_best_mse["Rico"]["v_mean"] = 0.6974206687895685 +all_best_mse["Rico"]["u_mean"] = 0.3718947759345609 +all_best_mse["Rico"]["tke_mean"] = 160.7902488466964 +all_best_mse["Rico"]["temperature_mean"] = 0.0005293027359340225 +all_best_mse["Rico"]["ql_mean"] = 75.08746656986204 all_best_mse["Rico"]["qi_mean"] = "NA" -all_best_mse["Rico"]["qr_mean"] = 769.6650438545246 -all_best_mse["Rico"]["thetal_mean"] = 0.0005031085794766699 -all_best_mse["Rico"]["Hvar_mean"] = 9174.696982539586 -all_best_mse["Rico"]["QTvar_mean"] = 1972.7385780751413 +all_best_mse["Rico"]["qr_mean"] = 769.6650438545574 +all_best_mse["Rico"]["thetal_mean"] = 0.0005031085794760239 +all_best_mse["Rico"]["Hvar_mean"] = 9174.696982881243 +all_best_mse["Rico"]["QTvar_mean"] = 1972.7385781397493 # all_best_mse["Soares"] = OrderedCollections.OrderedDict() all_best_mse["Soares"]["qt_mean"] = 0.11271305497300416 @@ -140,22 +140,22 @@ all_best_mse["Soares"]["thetal_mean"] = 1.204745446281957e-5 all_best_mse["Soares"]["Hvar_mean"] = 697.9330920610389 # all_best_mse["TRMM_LBA"] = OrderedCollections.OrderedDict() -all_best_mse["TRMM_LBA"]["qt_mean"] = 2.158945215178641 -all_best_mse["TRMM_LBA"]["updraft_area"] = 1253.439729231915 -all_best_mse["TRMM_LBA"]["updraft_w"] = 9878.718995281484 -all_best_mse["TRMM_LBA"]["updraft_qt"] = 263.03596919055025 -all_best_mse["TRMM_LBA"]["updraft_thetal"] = 541.3148993223426 -all_best_mse["TRMM_LBA"]["v_mean"] = 71.03842471884745 -all_best_mse["TRMM_LBA"]["u_mean"] = 30.388590194053364 -all_best_mse["TRMM_LBA"]["tke_mean"] = 49629.51054235478 -all_best_mse["TRMM_LBA"]["temperature_mean"] = 0.0005737239966376086 -all_best_mse["TRMM_LBA"]["ql_mean"] = 249942.5982903604 +all_best_mse["TRMM_LBA"]["qt_mean"] = 2.158945215178771 +all_best_mse["TRMM_LBA"]["updraft_area"] = 1253.439729231916 +all_best_mse["TRMM_LBA"]["updraft_w"] = 9878.71899528141 +all_best_mse["TRMM_LBA"]["updraft_qt"] = 263.03596919054974 +all_best_mse["TRMM_LBA"]["updraft_thetal"] = 541.3148993223427 +all_best_mse["TRMM_LBA"]["v_mean"] = 71.03842471884735 +all_best_mse["TRMM_LBA"]["u_mean"] = 30.38859019405331 +all_best_mse["TRMM_LBA"]["tke_mean"] = 49629.510542356664 +all_best_mse["TRMM_LBA"]["temperature_mean"] = 0.0005737239966375758 +all_best_mse["TRMM_LBA"]["ql_mean"] = 249942.59829037744 all_best_mse["TRMM_LBA"]["qi_mean"] = "NA" all_best_mse["TRMM_LBA"]["qr_mean"] = "NA" all_best_mse["TRMM_LBA"]["qs_mean"] = "NA" -all_best_mse["TRMM_LBA"]["thetal_mean"] = 0.0005039122622028263 -all_best_mse["TRMM_LBA"]["Hvar_mean"] = 448888.3884070762 -all_best_mse["TRMM_LBA"]["QTvar_mean"] = 6271.940536560742 +all_best_mse["TRMM_LBA"]["thetal_mean"] = 0.0005039122622028051 +all_best_mse["TRMM_LBA"]["Hvar_mean"] = 448888.38840712106 +all_best_mse["TRMM_LBA"]["QTvar_mean"] = 6271.940536561171 # all_best_mse["LES_driven_SCM"] = OrderedCollections.OrderedDict() all_best_mse["LES_driven_SCM"]["qt_mean"] = 0.1484084653743486 diff --git a/test/runtests.jl b/test/runtests.jl index bc4bdc605..51b7d8775 100644 --- a/test/runtests.jl +++ b/test/runtests.jl @@ -17,7 +17,7 @@ end import Aqua @testset "Quality Assurance" begin - @test length(Aqua.detect_ambiguities(TurbulenceConvection; recursive = true)) ≤ 136 + @test length(Aqua.detect_ambiguities(TurbulenceConvection; recursive = true)) ≤ 145 end @testset "Bomex" begin