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mkdocs.yml
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site_name: Siibra Explorer User Documentation
theme:
name: 'material'
repo_url: https://github.com/fzj-inm1-bda/siibra-explorer
extra_css:
- extra.css
docs_dir: docs
markdown_extensions:
- admonition
- codehilite
- footnotes
- mdx_truly_sane_lists
- attr_list
- toc
- attr_list
- pymdownx.emoji:
emoji_index: !!python/name:material.extensions.emoji.twemoji
emoji_generator: !!python/name:material.extensions.emoji.to_svg
plugins:
- search
nav:
- Home: 'index.md'
- Getting Started:
- Launch & quick tour: 'getstarted/launch.md'
- Elements of an atlas: 'getstarted/atlas_elements.md'
- User interface structure: 'getstarted/ui.md'
- Keyboard shortcuts: 'basics/helperOnePager.md'
- Basic Functionalities:
- Exploring parcellation maps: 'basics/exploring_3d_parcellation_maps.md'
- Storing & sharing 3D views: 'basics/storing_and_sharing_3d_views.md'
- Finding & selecting regions: 'basics/selecting_brain_regions.md'
- Coordinate lookups: 'basics/looking_up_coordinates.md'
- Multimodal data features: 'basics/finding_multimodal_data.md'
- Advanced functionalities:
- State encoding in URL: "advanced/url_encoding.md"
- Superimposing local files: "advanced/superimposing_local_files.md"
- Annotating structures in the brain: "advanced/annotating_structures.md"
- Differential gene expression analysis: "advanced/differential_gene_expression_analysis.md"
- Release notes:
- v2.14.15: 'releases/v2.14.15.md'
- v2.14.14: 'releases/v2.14.14.md'
- v2.14.13: 'releases/v2.14.13.md'
- v2.14.12: 'releases/v2.14.12.md'
- v2.14.11: 'releases/v2.14.11.md'
- v2.14.10: 'releases/v2.14.10.md'
- v2.14.9: 'releases/v2.14.9.md'
- v2.14.8: 'releases/v2.14.8.md'
- v2.14.7: 'releases/v2.14.7.md'
- v2.14.6: 'releases/v2.14.6.md'
- v2.14.5: 'releases/v2.14.5.md'
- v2.14.4: 'releases/v2.14.4.md'
- v2.14.3: 'releases/v2.14.3.md'
- v2.14.2: 'releases/v2.14.2.md'
- v2.14.1: 'releases/v2.14.1.md'
- v2.14.0: 'releases/v2.14.0.md'
- v2.13.5: 'releases/v2.13.5.md'
- v2.13.4: 'releases/v2.13.4.md'
- v2.13.3: 'releases/v2.13.3.md'
- v2.13.2: 'releases/v2.13.2.md'
- v2.13.1: 'releases/v2.13.1.md'
- v2.13.0: 'releases/v2.13.0.md'
- v2.12.5: 'releases/v2.12.5.md'
- v2.12.4: 'releases/v2.12.4.md'
- v2.12.3: 'releases/v2.12.3.md'
- v2.12.2: 'releases/v2.12.2.md'
- v2.12.1: 'releases/v2.12.1.md'
- v2.12.0: 'releases/v2.12.0.md'
- v2.11.4: 'releases/v2.11.4.md'
- v2.11.3: 'releases/v2.11.3.md'
- v2.11.2: 'releases/v2.11.2.md'
- v2.11.1: 'releases/v2.11.1.md'
- v2.11.0: 'releases/v2.11.0.md'
- v2.10.3: 'releases/v2.10.3.md'
- v2.10.2: 'releases/v2.10.2.md'
- v2.10.1: 'releases/v2.10.1.md'
- v2.10.0: 'releases/v2.10.0.md'
- v2.9.1: 'releases/v2.9.1.md'
- v2.9.0: 'releases/v2.9.0.md'
- v2.8.0: 'releases/v2.8.0.md'
- v2.7.7: 'releases/v2.7.7.md'
- v2.7.6: 'releases/v2.7.6.md'
- v2.7.5: 'releases/v2.7.5.md'
- v2.7.4: 'releases/v2.7.4.md'
- v2.7.3: 'releases/v2.7.3.md'
- v2.7.2: 'releases/v2.7.2.md'
- v2.7.1: 'releases/v2.7.1.md'
- v2.7.0: 'releases/v2.7.0.md'
- v2.6.10: 'releases/v2.6.10.md'
- v2.6.9: 'releases/v2.6.9.md'
- v2.6.8: 'releases/v2.6.8.md'
- v2.6.7: 'releases/v2.6.7.md'
- v2.6.6: 'releases/v2.6.6.md'
- v2.6.5: 'releases/v2.6.5.md'
- v2.6.4: 'releases/v2.6.4.md'
- v2.6.3: 'releases/v2.6.3.md'
- v2.6.2: 'releases/v2.6.2.md'
- v2.6.1: 'releases/v2.6.1.md'
- v2.6.0: 'releases/v2.6.0.md'
- v2.5.8: 'releases/v2.5.8.md'
- v2.5.7: 'releases/v2.5.7.md'
- v2.5.6: 'releases/v2.5.6.md'
- v2.5.5: 'releases/v2.5.5.md'
- v2.5.4: 'releases/v2.5.4.md'
- v2.5.3: 'releases/v2.5.3.md'
- v2.5.2: 'releases/v2.5.2.md'
- v2.5.1: 'releases/v2.5.1.md'
- v2.5.0: 'releases/v2.5.0.md'
- v2.4.8: 'releases/v2.4.8.md'
- v2.4.7: 'releases/v2.4.7.md'
- v2.4.6: 'releases/v2.4.6.md'
- v2.4.5: 'releases/v2.4.5.md'
- v2.4.4: 'releases/v2.4.4.md'
- v2.4.3: 'releases/v2.4.3.md'
- v2.4.2: 'releases/v2.4.2.md'
- v2.4.1: 'releases/v2.4.1.md'
- v2.4.0: 'releases/v2.4.0.md'
- v2.3.11: 'releases/v2.3.11.md'
- v2.3.10: 'releases/v2.3.10.md'
- v2.3.9: 'releases/v2.3.9.md'
- v2.3.8: 'releases/v2.3.8.md'
- v2.3.7: 'releases/v2.3.7.md'
- v2.3.6: 'releases/v2.3.6.md'
- v2.3.5: 'releases/v2.3.5.md'
- v2.3.4: 'releases/v2.3.4.md'
- v2.3.3: 'releases/v2.3.3.md'
- v2.3.2: 'releases/v2.3.2.md'
- v2.3.1: 'releases/v2.3.1.md'
- v2.3.0: 'releases/v2.3.0.md'
- v2.2.7: 'releases/v2.2.7.md'
- v2.2.6: 'releases/v2.2.6.md'
- v2.2.5: 'releases/v2.2.5.md'
- v2.2.4: 'releases/v2.2.4.md'
- v2.2.3: 'releases/v2.2.3.md'
- v2.2.2: 'releases/v2.2.2.md'
- v2.2.1: 'releases/v2.2.1.md'
- v2.2.0: 'releases/v2.2.0.md'
- v2.1.3: 'releases/v2.1.3.md'
- v2.1.2: 'releases/v2.1.2.md'
- v2.1.1: 'releases/v2.1.1.md'
- v2.1.0: 'releases/v2.1.0.md'
- v2.0.2: 'releases/v2.0.2.md'
- v2.0.1: 'releases/v2.0.1.md'
- v2.0.0: 'releases/v2.0.0.md'
- v0.3.0-beta: 'releases/v0.3.0-beta.md'
- v0.2.9: 'releases/v0.2.9.md'
- v0.2.0: 'releases/v0.2.0.md'
- v0.1.0: 'releases/v0.1.0.md'
- legacy: 'releases/legacy.md'