DESCRIPTION

Package: CHAS
Title: Cell type deconvolution of bulk tissue histone acetylomes from epigenetic data
Version: 0.99.8
Description: CHAS is an R package which integrates cell sorted H3K27ac data to identify cell type-specific peaks in bulk tissue H3K27ac profiles. Using the cell type-specific H3K27ac peaks, one can then calculate cell type-specific acetylation scores to act as a proxy for cell type proportion in the bulk tissue sample.
Authors@R: 
    person(given = "Kitty",
           family = "Murphy",
           role = c("aut", "cre"),
           email = "c.murphy19@ic.ac.uk",
           comment = c(ORCID = "YOUR-ORCID-ID"))
biocViews:
Imports: 
    data.table,
    dplyr,
    edgeR,
    GenomicRanges,
    ggplot2,
    ggpubr,
    IRanges,
    RColorBrewer,
    Rsubread,
    stringi,
    tidyr,
    tidyverse,
    wesanderson, 
    ggpattern,
    S4Vectors
License: GPL (>= 3) + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: 
    R (>= 3.6.0)
Suggests: 
    testthat (>= 3.0.0)
Config/testthat/edition: 3