diff --git a/modules.json b/modules.json
index ddcb279..2cc6c58 100644
--- a/modules.json
+++ b/modules.json
@@ -1,46 +1,59 @@
 {
-  "name": "NBIS Genome Annotation Workflow",
-  "homePage": "",
-  "repos": {
-    "https://github.com/nf-core/modules.git": {
-      "modules": {
-        "nf-core": {
-          "blast/makeblastdb": {
-            "branch": "master",
-            "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
-            "installed_by": ["modules"],
-            "patch": "modules/nf-core/blast/makeblastdb/blast-makeblastdb.diff"
-          },
-          "busco": {
-            "branch": "master",
-            "git_sha": "6d6552cb582f56b6101c452e16ee7c23073f91de",
-            "installed_by": ["modules"]
-          },
-          "fastp": {
-            "branch": "master",
-            "git_sha": "d497a4868ace3302016ea8ed4b395072d5e833cd",
-            "installed_by": ["modules"]
-          },
-          "fastqc": {
-            "branch": "master",
-            "git_sha": "9a4517e720bc812e95b56d23d15a1653b6db4f53",
-            "installed_by": ["modules"]
-          },
-          "interproscan": {
-            "branch": "master",
-            "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
-            "installed_by": ["modules"]
-          },
-          "multiqc": {
-            "branch": "master",
-            "git_sha": "a6e11ac655e744f7ebc724be669dd568ffdc0e80",
-            "installed_by": ["modules"]
-          }
+    "name": "NBIS Genome Annotation Workflow",
+    "homePage": "",
+    "repos": {
+        "https://github.com/nf-core/modules.git": {
+            "modules": {
+                "nf-core": {
+                    "blast/makeblastdb": {
+                        "branch": "master",
+                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
+                        "installed_by": [
+                            "modules"
+                        ],
+                        "patch": "modules/nf-core/blast/makeblastdb/blast-makeblastdb.diff"
+                    },
+                    "busco": {
+                        "branch": "master",
+                        "git_sha": "6d6552cb582f56b6101c452e16ee7c23073f91de",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    },
+                    "fastp": {
+                        "branch": "master",
+                        "git_sha": "d497a4868ace3302016ea8ed4b395072d5e833cd",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    },
+                    "fastqc": {
+                        "branch": "master",
+                        "git_sha": "9a4517e720bc812e95b56d23d15a1653b6db4f53",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    },
+                    "interproscan": {
+                        "branch": "master",
+                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
+                        "installed_by": [
+                            "modules"
+                        ],
+                        "patch": "modules/nf-core/interproscan/interproscan.diff"
+                    },
+                    "multiqc": {
+                        "branch": "master",
+                        "git_sha": "a6e11ac655e744f7ebc724be669dd568ffdc0e80",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    }
+                }
+            },
+            "subworkflows": {
+                "nf-core": {}
+            }
         }
-      },
-      "subworkflows": {
-        "nf-core": {}
-      }
     }
-  }
-}
+}
\ No newline at end of file
diff --git a/modules/nf-core/interproscan/interproscan.diff b/modules/nf-core/interproscan/interproscan.diff
new file mode 100644
index 0000000..e49e70d
--- /dev/null
+++ b/modules/nf-core/interproscan/interproscan.diff
@@ -0,0 +1,37 @@
+Changes in module 'nf-core/interproscan'
+--- modules/nf-core/interproscan/main.nf
++++ modules/nf-core/interproscan/main.nf
+@@ -27,10 +27,11 @@
+     def is_compressed = fasta.name.endsWith(".gz")
+     def fasta_name = fasta.name.replace(".gz", "")
+ 
+-    def appl = "-appl TIGRFAM,FunFam,SFLD,PANTHER,Gene3D,Hamap,ProSiteProfiles,Coils,SMART,CDD,PRINTS,PIRSR,ProSitePatterns,AntiFam,Pfam,MobiDBLite"
+-    if ( args.contains("-appl") ) {
+-        appl = ""
+-    }
++// get rid of a predefined set of applications, we always want to see applications
++//    def appl = "-appl TIGRFAM,FunFam,SFLD,PANTHER,Gene3D,Hamap,ProSiteProfiles,Coils,SMART,CDD,PRINTS,PIRSR,ProSitePatterns,AntiFam,Pfam,MobiDBLite"
++//    if ( args.contains("-appl") ) {
++//        appl = ""
++//    }
+     switch ( out_ext ) {
+         case "tsv": break
+         case "xml": break
+@@ -43,6 +44,7 @@
+     }
+ 
+     //  -dp (disable precalculation) is on so no online dependency
++    // removed argument "${appl} \\" from interproscan.sh command call
+     """
+     if [ "${is_compressed}" == "true" ]; then
+         gzip -c -d ${fasta} > ${fasta_name}
+@@ -53,7 +55,6 @@
+         -i ${fasta_name} \\
+         -f ${out_ext} \\
+         -dp \\
+-        ${appl} \\
+         ${args} \\
+         -o ${prefix}.${out_ext}
+ 
+
+************************************************************