devtools_tests.yml

name: Devtools Tests
on:
  pull_request:
    branches:
      - main
      - dev*
jobs:
  build:
    runs-on: macos-latest
    strategy:
      matrix:
        r-version: ['4.1.1']
    
    env:
      SYNAPSE_PAT: ${{ secrets.SYNAPSE_PAT }}
      SCHEMATIC_URL_DEV: https://schematic-dev.api.sagebionetworks.org
      SCHEMATIC_URL_STAGING: https://schematic-staging.api.sagebionetworks.org
      SCHEMATIC_URL_PROD: https://schematic.api.sagebionetworks.org

    steps:
      - uses: actions/checkout@v3
      - name: Set up R ${{ matrix.r-version }}
        uses: r-lib/actions/setup-r@f57f1301a053485946083d7a45022b278929a78a
        with:
          r-version: ${{ matrix.r-version }}
      - name: Install dependencies
        run: |
          install.packages(c("remotes", "rcmdcheck", "devtools"))
          remotes::install_deps(dependencies = TRUE)
        shell: Rscript {0}
      - name: Add schematic base URL to Renviron
        run: |
    
          refName <- Sys.getenv("GITHUB_REF_NAME")
          
          if (grepl("v[0-9]+.[0-9]+.[0-9]+", refName)) {
            message("Testing using production schematic API instance")
            renviron <- "DFA_SCHEMATIC_API_URL = '${{ env.SCHEMATIC_URL_PROD }}'"
            } else if (refName == "main") {
              renviron <- "DFA_SCHEMATIC_API_URL = '${{ env.SCHEMATIC_URL_STAGING }}'"
              message("Testing using staging schematic API instance")
          } else {
            renviron <- "DFA_SCHEMATIC_API_URL = '${{ env.SCHEMATIC_URL_DEV }}'"
            message("Testing using dev schematic API instance")
          }

          # write .Renviron
          writeLines(renviron, ".Renviron") 

        shell: Rscript {0}
      - name: Check
        run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error")
        shell: Rscript {0}