[Review]: Introduction to genomic data analysis with R and Bioconductor

[lgatto]

Lesson Title

Introduction to genomic data analysis with R and Bioconductor

Lesson Repository URL

https://github.com/carpentries-incubator/bioc-intro/

Lesson Website URL

https://carpentries-incubator.github.io/bioc-intro/

Lesson Description

This is the first part of a series of lessons prepared by the Bioconductor teaching group. It introduces general data science with R and the tidyverse and the Bioconductor SummarizedExperiment data structure for quantitative omics assays. It is means for complete beginners without any pre-requisites.

Author Usernames

@lgatto @csoneson

Zenodo DOI

No response

Differences From Existing Lessons

The lesson is similar that the ecology lesson, but with a focus on biomedical data, and has a dedicated chapter on Bioconductor.

Confirmation of Lesson Requirements

• is the original work of the author(s), or that any content derived from another source is reused with permission and appropriate attribution
• aligns with The Carpentries Code of Conduct
• is published under a CC-BY or CC0 license
• uses The Carpentries lesson template or Carpentries Workbench without significant customisation/adaptation.

JOSE Submission Requirements

• the lesson repository includes paper.md and paper.bib files as described in the JOSE submission guide for learning modules

Potential Reviewers

No response