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gb

Genomic breeding workflow

Build Status License
License: GPL v3

TODO: Consolidate db, gp, and simquantgen into this single workflow plus various selection strategies incorporating selection simulations

Manage the project via uv and ruff:

cd gb/
pip install uv
pip install ruff
uv init .
uv add pytest mypy numpy progressbar2 pysnptools scikit-learn matplotlib polars click
uv run ruff format
uv run ruff check
uv run mypy
uv run pytest