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Adding Snakemake tests to Funnel would allow for increased interoperability with existing workflows. Ideally the tests would be automated and be able to run in Github Actions à la the nf-canay test suite used for Nextflow
See Pull Request #761 for an example of integrating this into Funnel's testing.
Overview
Adding Snakemake tests to Funnel would allow for increased interoperability with existing workflows. Ideally the tests would be automated and be able to run in Github Actions à la the nf-canay test suite used for Nextflow
See Pull Request #761 for an example of integrating this into Funnel's testing.
It might be worth considering the snakemake-github-action as part of this effort.
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