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    12 repositories

    • Neurite_fluorescence_analysis

      Public
      Comprehensive script for measuring fluorescence intensity in diffuse and punctate pools, inter-punctum intervals (IPI), puncta colocalization, intensity correlation quotient (ICQ) in neurites.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Nov 29, 2023Nov 29, 2023

    • FRAP

      Public
      Python
      •0•0•0•0•Updated Nov 29, 2023Nov 29, 2023

    • Puncta_analysis

      Public
      Python
      •
      MIT License
      •1•0•0•0•Updated Dec 1, 2022Dec 1, 2022

    • WormSkin

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Nov 14, 2022Nov 14, 2022

    • MEC-4_punctate_diffuse_pools

      Public
      Python
      •0•0•0•0•Updated Feb 5, 2022Feb 5, 2022

    • MEC-4_RAB-3_vesicle_colocalization

      Public
      Python
      •0•0•0•0•Updated Feb 5, 2022Feb 5, 2022

    • ICQ

      Public
      Python
      •0•0•0•0•Updated Feb 5, 2022Feb 5, 2022

    • IPI

      Public
      Python
      •0•0•0•0•Updated Feb 5, 2022Feb 5, 2022

    • AnalysisFunction

      Public
      Analysis Function provides scripts to analyze electrophysiological data recorded with the HEKA system: the FALCON patch clamp system which combines the application of mechanical stimuli with self-sensing cantilever (Patchmaster_Falcon) and the two electrode voltage clamp system (Patchmaster_TEVC).
      MATLAB
      •1•0•0•0•Updated Apr 29, 2021Apr 29, 2021

    • JupyterNotebooksDEGENaCPharm

      Public
      Jupyter notebookes to create figures for the data for the functional and pharmacological characterization of DEG/ENaC/ASIC channels in Xenopus oocytes
      Jupyter Notebook
      •0•0•0•0•Updated Apr 24, 2021Apr 24, 2021

    • Matlab-PatchMaster

      Public
      Matlab functions for importing and dealing with Patchmaster data for electrophysiology.
      hekapatchmastermatlabelectrophysiologysigtool
      MATLAB
      •
      MIT License
      •4•1•1•0•Updated Apr 21, 2021Apr 21, 2021

    • whole_genome_sequencing

      Public
      scripts for analyzing whole-genome sequencing used to determine the molecular defect in him-4 mutants. linked to published paper (Nekimken et al, 2020, doi: 10.1091/mbc.E20-01-0049)
      Shell
      •0•0•0•0•Updated Feb 11, 2020Feb 11, 2020