various tools that help with deep sequencing analysis

SRSF shape analysis framework for sequencing data

WOLAND is a multiplatform tool to analyze point mutation patterns using resequencing data from any organism or cell. It is implemented as a Perl and R tool using as inputs filtered unannotated or annotated SNV lists, combined with its correspondent genome sequences.

iSkyLIMS home website for information and links purposes

1D intervals incremental inverted index

Data portal and API for Center for Viral Systems Biology (CViSB) data

Mitochondrial DNA sequence assembly and annotation for nematodes using NGS data.

This repository contains a internal web page for sequencing runs management for NextSeq and MiSeq Illumina machines.

Detection of CNVs (deletion/duplication) in target panel based NGS data

A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.