Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
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Updated
Oct 31, 2024 - C++
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
In-silico PCR, primer design and padlock design for in-situ sequencing
In-silico PCR amplification on complete genomes
x86-64 Pipeline used to trim and combine sanger raw data to retrieve a consesus read and other results
sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
SYLENS: Sampling Yielding LEss Noticeable Samples
A tool to batch-generate optimal DNA primers for Sanger sequencing. Output .xlsx file is directly compatible with IDT Oligo Entry.
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Extract and distribute ab1 files from Sanger DNA sequencing to folders of their respective owners.
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