Fitting DNA single-molecule force-extension curves in MATLAB

Data analysis for Ingargiola et al. PLOS ONE (2017) doi:10.1101/085027

mdtraj_fps ia a command line tool to calculate FRET observables form MD-trajectories

Burst analysis software for smFRET. **Moved to OpenSMFS organization**

A simulator for single molecule FRET experiments of freely diffusing particles.

Implements a modified version of the CUSUM algorithm for robust detection of step-like changes time-series data

single molecule tracking

A useful tool for working with Oxford Nanoimager microscope single-molecule localization data.

Dwell time analysis of single-molecule force-spectroscopy data

Single Molecule Fluorescence Simulator Toolkit

Detection of Molecules plugin for ImageJ, Utrecht University

A modular single-molecule analysis interface

ASCAM is Advanced Single Channel Analysis for Mac (and others)

Maximum likelihood fits for low photon count data - For active develeopment visit gitlab.peulen.xyz

Single-molecule force spectroscopy calibration

Matlab software for simulation of two-dimensional single particle tracking (SPT) data sets.

Single-moecule imaging and computation with RNA

This is a repo for a Python based application to open SMS .h5 files, and perform the initial analysis and exporting.

This Python library is designed to enhance the performance of single-particle tracking (SPT) algorithms by leveraging Cython.

MATLAB package to analyze single-molecule FRET data