SNP_density_plot_from_VCF_python Author: Abdelmajid EL HOU, Data analyst - France version 1.0 date: 25-10-2021
tested on ubuntu with python3.8
This python program parse a Variant Call Format (VCF) file and then create a polymorphism density plot from the data extracted from the file. The program take as input: the file name, window and increment value.
example: python3.8 generate_density_data.py chr02.vsc 1000000 1000
the output is a png file (plot). The script and the vcf file should be in the same directory.

Any improvments are welcome :)