v0.1.1

ClimaCoupler v0.1.1

Diff since v0.1.0

Merged pull requests:

• tests on GPU - plots (#749) (@juliasloan25)
• Update climacommon to 2024_04_30 (#763) (@Sbozzolo)
• Change units to mm/day for leaderboard (#771) (@Sbozzolo)
• Refactor ClimaEarth experiment dir (#789) (@LenkaNovak)
• update deps (#794) (@juliasloan25)
• rm GPU utilities test (#796) (@juliasloan25)
• Add dry Held-Suarez run script (#798) (@LenkaNovak)
• Add RMSE leaderboard (#799) (@Sbozzolo)
• Add moist Held-Suarez run script (#801) (@LenkaNovak)
• use ClimaAtmos aquaplanet_diagedmf.yml (#802) (@juliasloan25)
• pass in job_id as command line argument (#804) (@juliasloan25)
• rm bycolumn (#805) (@juliasloan25)
• add dependabot (#806) (@juliasloan25)
• Add cloud-less aquaplanet driver (#808) (@LenkaNovak)
• Add cloudy aquaplanet driver (#811) (@LenkaNovak)
• Add cloudy slabplanet driver (#813) (@LenkaNovak)
• Hierarchy visualizations (#815) (@LenkaNovak)
• set job_id for interactive runs (#816) (@juliasloan25)
• add atmos to table (#817) (@juliasloan25)
• Add other models to leaderboard (#821) (@Sbozzolo)
• update deps (#822) (@AlexisRenchon)
• Update Github workflows (#830) (@Sbozzolo)
• Add "triangle" plot (#831) (@Sbozzolo)
• Discard spin up period in leaderboard (#835) (@Sbozzolo)
• Add Artifacts.toml to test (#836) (@Sbozzolo)
• use ClimaAtmos@0.24.3 (#839) (@juliasloan25)
• rename diag edmf toml file (#840) (@juliasloan25)
• make restart run soft fail (#841) (@juliasloan25)
• change buildkite output folder (#842) (@juliasloan25)
• Update amip_target_topo_diagedmf.yml (#843) (@szy21)
• Add boxes in bias_leaderboard (#845) (@Sbozzolo)
• add radiative fluxes to leaderboard (#846) (@szy21)
• fix the order of season in leaderboard (#848) (@szy21)
• separate CPU/GPU target longrun configs (#852) (@juliasloan25)
• Use divergent colormap in bias plots (#855) (@Sbozzolo)
• Fix discard spinup in leaderboad and add best/worst single models (#857) (@Sbozzolo)
• Fix typo in longrun pipeline (#859) (@szy21)
• Pass context to FiniteDifferenceSpace (#861) (@charleskawczynski)
• Use ClimaComms0.6, ClimaAtmos0.26, and update ClimaEarth experiments (#864) (@akshaysridhar)
• Bugfix: beta, drag coefficient assignment (#866) (@akshaysridhar)
• Fix for ClimaLand 0.12.4 (#868) (@Sbozzolo)
• Update dependencies (#870) (@charleskawczynski)
• remove use_reference_state from the config (#871) (@szy21)
• Add 1M scheme to CI (#872) (@trontrytel)
• Update manifest (#873) (@szy21)
• use ARS343 for diag EDMF benchmarks (#874) (@juliasloan25)
• update driver docs (#878) (@juliasloan25)
• Clean up long-run pipeline, info statements. (#879) (@akshaysridhar)
• Update climaatmos.yml in benchmark (#880) (@szy21)
• add most recent amip to pipeline (#883) (@szy21)
• Add benchmark job with IO (#884) (@Sbozzolo)
• remove ediff diagnostics (#887) (@szy21)
• Update ClimaAtmos compat to 0.27, ClimaLand to 0.13 (#889) (@akshaysridhar)
• fix amip pipeline (#890) (@szy21)
• use 1 gpu for amip pipeline (#891) (@szy21)
• remove build history in amip pipeline (#893) (@szy21)
• remove leaderboard from slack report in the longrun pipepline (#894) (@szy21)
• Update to fix compat with breaking ClimaLand release (#896) (@akshaysridhar)
• use default numerics config and parameters (#899) (@szy21)
• try fixing slack report in amip pipeline (#902) (@szy21)
• Release Coupler v0.1.1 + update compat following ClimaAtmos 0.27.2 patch release (#903) (@akshaysridhar)
• update climaatmos to 0.27.1 (#906) (@szy21)
• fix atmos_config_file in longrun config (#908) (@szy21)
• clean up longrun config (#909) (@szy21)
• do not use aerosols in the amip run (#911) (@szy21)
• fix config file name in longrun pipeline (#912) (@szy21)

Closed issues:

• NSight Systems Implementation (#235)
• Clean up CI (#302)
• Performance tips (#323)
• BCReader bugs (#327)
• extend BCReader interpolate_data tests (#384)
• O1.2.5 Atmos-land simulations on GPU at 1 SYPD on 4 A100s (#390)
• O1.5.3e (coupler) Leaderboard for AMIP (#407)
• decide on convention for using module within module (#447)
• Setup example hierarchy (#488)
• make tests GPU-compatible (#571)
• Reduce conservation error to sqrt(eps) (#594)
• check parameter consistency between components (#610)
• fix libLLVM error, add back windows GHA (#631)
• Use Frierson diffusion in amip target longrun (#645)
• MPI runs on CI fail after postprocessing (#664)
• Investigate CPU conservation degradation at radiation dt (#710)
• /groups/esm/slurm-buildkite/climacoupler-ci folder (#713)
• tests on GPU - remove Fields.bycolumn (#736)
• tests on GPU - plots (#750)
• Hierarchies: Dry Held-Suarez driver (#759)
• Hierarchies: Moist Held-Suarez driver (#760)
• Hierarchies: Cloud-less aquaplanet driver (#761)
• Hierarchies: Cloudy aquaplanet driver (#762)
• Fix land albedo regridding (#764)
• Investigate most stable sponge parameters (#773)
• remove job_id from config files (#776)
• table improvement: add atmos run without diag EDMF (#778)
• Move precipitation observation to ClimaArtifacts (#781)
• try topo + diag edmf longrun with Float64 (#784)
• Refactor ClimaEarth experiment dir (#788)
• update for latest dependencies (#792)
• remove GPU Utilities test (#795)
• Update longruns for ClimaAtmos config changes (#800)
• Stabilize EDMF longrun after updating to ClimaAtmos = "0.24" (#809)
• Hierarchies: Cloudy slabplanet (AMIP minus data) (#812)
• add hierarchy data visualizations (#814)
• Change back the GPU longrun config to 300d (#820)
• tests cannot be run unless the ClimaEarth environment is initialized (#834)
• Update to ClimaComms v0.6 (#837)
• Remove ArtifactWrappers; document artifacts (#838)
• O1.5.x Make a good multiyear simulation before 7/4 (#847)
• precipitation is not defined for 1M microphysics (#849)
• Unphysical values in TOA downward SW flux (#851)
• No output in netcdf when cpu run breaks (#858)
• check fields regridded with TempestRemap (#860)
• fix BulkScheme beta setting (#862)
• Stabilize diagnostic EDMF + 0M AMIP run (#865)
• NaN in longwave radiation flux (#869)
• O1.5.2d Run AMIP simulation with 0M microphysics (#876)
• create minimal Atmos/Land experiment (#877)
• Set up a pipeline for the best AMIP we have (#881)
• Update insolation config args (#882)
• Land model compat update (#895)
• O1.5.2e Run AMIP simulation with 1M microphysics (#901)
• Change atmos yaml and toml file in longrun after ClimaAtmos update (#905)
• Cleanup longrun (#907)
• Error in prescribing aerosols from the coupler (#910)

v0.1.0

ClimaCoupler v0.1.0

Merged pull requests:

• Test adding to document (#2) (@christophernhill)
• Add Base.show for CplState object. (#3) (@jb-mackay)
• Spherical unit test: Filters and balance law clean (#4) (@LenkaNovak)
• Add literate (#5) (@christophernhill)
• Docs update (#6) (@jb-mackay)
• Rename CplState Interface (#7) (@jb-mackay)
• Simple Slab Land (#8) (@LenkaNovak)
• Bm/bickleyjets (#9) (@jb-mackay)
• Slab Ocean + Atmos Held-Suarez (#10) (@LenkaNovak)
• CplSolver Unit Tests (#11) (@jb-mackay)
• Move column test cases from climacore repo (#14) (@LenkaNovak)
• Update README.tex.md (#15) (@kmdeck)
• Coupled Timestepping Interface (#16) (@jb-mackay)
• Configure some CI infra (#20) (@charleskawczynski)
• SurfaceFluxes.jl plugin (#24) (@LenkaNovak)
• Test case 1 update + conversion to tutorial (#25) (@LenkaNovak)
• Fix and test coupler show (#28) (@jb-mackay)
• Apply CliMA formatter (#29) (@jb-mackay)
• Rename to ClimaCoupler (#30) (@jb-mackay)
• Simplify deps, do not track docs Manifest (#31) (@charleskawczynski)
• Update logo (#32) (@jb-mackay)
• Add sea breeze example (#33) (@jb-mackay)
• Naming updates (#34) (@jb-mackay)
• Update CI to Julia 1.7 (#35) (@jb-mackay)
• Add NOTICE file for copyright. (#36) (@jb-mackay)
• Diffusive baroclinic wave with thermal slab (#37) (@LenkaNovak)
• 0-layer sea-ice model in SCM (#46) (@LenkaNovak)
• Formatter update (#47) (@LenkaNovak)
• Moist BC wave + slab + MPI (#48) (@LenkaNovak)
• Strip coupler interface to basics (#52) (@jb-mackay)
• Add basic simulations wrappers (#53) (@jb-mackay)
• Remove Manifest and update gitignore. (#54) (@jb-mackay)
• Add buildkite.yml. (#56) (@jb-mackay)
• Bucket2.0 (#57) (@kmdeck)
• Add remapping to coupler puts & gets (#58) (@jb-mackay)
• Remove TC1 from docs examples. (#62) (@jb-mackay)
• Dynamical Sea Ice Model (#69) (@LenkaNovak)
• Sea Breeze Tutorial Docs (#75) (@jb-mackay)
• Add coupler_get! (#76) (@jb-mackay)
• Fix gitignore for Manifest files. (#77) (@jb-mackay)
• Remove outdated ClimateMachine experiments. (#78) (@jb-mackay)
• upgrade climacore and climaatmos (#81) (@kmdeck)
• Add coupler_push! and coupler_pull! to Sea Breeze (#83) (@jb-mackay)
• Add DocStringExtensions to Project toml (#85) (@jb-mackay)
• Basic calendar functionality (#87) (@LenkaNovak)
• Separate regridding from file reader (#89) (@LenkaNovak)
• Monthly updating of BCs from file (#90) (@LenkaNovak)
• Interface changes pulled from #90 (#93) (@LenkaNovak)
• Create CompatHelper.yml (#96) (@jb-mackay)
• Update for compatibility with ClimaAtmos@0.3.0 (#100) (@LenkaNovak)
• CompatHelper: add new compat entry for DocStringExtensions at version 0.9, (keep existing compat) (#101) (@github-actions[bot])
• regrid_space fix (#103) (@LenkaNovak)
• Daily interpolation from monthly data (v2) (#105) (@LenkaNovak)
• Add AMIP buildkite (#110) (@LenkaNovak)
• add remapping surface area test (#114) (@juliasloan25)
• Monthly averaging callback (#115) (@LenkaNovak)
• transition to using new bucket model version (#117) (@kmdeck)
• Conservation fix (#121) (@LenkaNovak)
• Coupler diagnostics (#122) (@LenkaNovak)
• Update ArtifactWrappers usage for 0.2.0 (#124) (@juliasloan25)
• Re-enable MPI + setup buildkite (#129) (@LenkaNovak)
• Bring fluxes up to date with ClimaAtmos0.5.0 (#132) (@LenkaNovak)
• Use ClimaTimeSteppers (#133) (@LenkaNovak)
• Add target resolution AMIP Buildkite drivers (#143) (@LenkaNovak)
• Regridder interface (#144) (@juliasloan25)
• Fix race condition with artifacts (#145) (@charleskawczynski)
• enable infrequent coupling (#146) (@LenkaNovak)
• Add AMIP tutorial (#147) (@LenkaNovak)
• CompatHelper: add new compat entry for NCDatasets at version 0.12, (keep existing compat) (#148) (@github-actions[bot])
• CompatHelper: add new compat entry for ClimaCommsMPI at version 0.3, (keep existing compat) (#154) (@github-actions[bot])
• CompatHelper: add new compat entry for SciMLBase at version 1, (keep existing compat) (#156) (@github-actions[bot])
• Conservation checker interface (#167) (@LenkaNovak)
• CompatHelper: add new compat entry for OrdinaryDiffEq at version 6, (keep existing compat) (#173) (@github-actions[bot])
• Boundary Condition Reader interface (#175) (@juliasloan25)
• CompatHelper: add new compat entry for ClimaLSM at version 0.2, (keep existing compat) (#185) (@github-actions[bot])
• Use SafeTestsets for testing (#193) (@juliasloan25)
• Increase slurm_mem allocation for MPI AMIP FINE test (#195) (@juliasloan25)
• Use land albedo from file, update packages (#197) (@juliasloan25)
• Remove FT values from structs (#198) (@juliasloan25)
• update modular driver to use BCReader module (#204) (@juliasloan25)
• Online Diagnostics Module (#206) (@LenkaNovak)
• TimeManager interface module (#209) (@juliasloan25)
• Some docstring improvements (#221) (@valeriabarra)
• Use relative module qualifiers for sibling modules (#223) (@valeriabarra)
• Interface Postprocessor v2 (#225) (@LenkaNovak)
• Avoid abstract types in structs (#227) (@valeriabarra)
• Add flamegraphs (#236) (@LenkaNovak)
• Extend flamegraphs to show alloc diff (#238) (@LenkaNovak)
• add build_history (#240) (@LenkaNovak)
• Add compats for Plots, CCore, CAtmos, CComms (#241) (@juliasloan25)
• update DSS calls for ClimaCore v0.10.25 (#244) (@juliasloan25)
• Fix paths for FlameGraphDiff on SLURM (#247) (@LenkaNovak)
• Make swap_spaces not allocating and more GPU compatible (#249) (@valeriabarra)
• BCReader: use generic struct properties (#251) (@valeriabarra)
• Remove FT_dot (#253) (@valeriabarra)
• Throw warnings when zeroing NaNs (#255) (@valeriabarra)
• Make comms_ctx a required arg (#257) (@valeriabarra)
• Add allocation percentage change info string (#259) (@valeriabarra)
• Add self count to FlameGraphDiff (#264) (@LenkaNovak)
• Report test 2 (#267) (@LenkaNovak)
• Add beta factor for evaporation (#268) (@juliasloan25)
• CompatHelper: bump compat for ClimaCore to 0.10, (keep existing compat) (#269) (@github-actions[bot])
• Refactor AMIP experiments (#270) (@LenkaNovak)
• Constrain surface area calculation for Float32 (#272) (@LenkaNovak)
• CompatHelper: bump compat for ClimaComms to 0.4, (keep existing compat) (#275) (@github-actions[bot])
• remove BucketSim params (#278) (@juliasloan25)
• Address buildkite memory issues (#279) (@juliasloan25)
• Sea Ice Energy Balance Clean-up (#283) (@LenkaNovak)
• Add compat entries to experiments/AMIP/modular Project.toml (#285) (@valeriabarra)
• Rename masks to fractions (#288) (@LenkaNovak)
• Add buildkites for mono / binary masks to the final release list (#289) (@LenkaNovak)
• Update to ClimaAtmos v0.11.0 and ClimaLSM v0.2.3 (#293) (@valeriabarra)
• Update CI to use exp/AMIP/modular/ (#304) (@juliasloan25)
• Update to ClimaAtmos v0.15.1 (#306) (@valeriabarra)
• Remove unused directories (#315) (@juliasloan25)
• Update combine_surfaces! (#316) (@LenkaNovak)
• Add flux module (#320) (@LenkaNovak)
• Update .gitignore w/ vscode artifacts (#324) (@valeriabarra)
• Add coupler's (combined) rho_sfc and q_sfc_sat calculation (#329) (@LenkaNovak)
• Enable q_sfc calculation from each surface model (#337) (@LenkaNovak)
• Update deps: use ClimaAtmos 0.15.2 (#345) (@valeriabarra)
• Add current target to longruns (#354) (@LenkaNovak)
• Update Manifest files (#357) (@valeriabarra)
• Flux partitioning (#361) (@LenkaNovak)
• Add model checkpoint and restart (#363) (@LenkaNovak)
• Update deps and CLI options (#366) (@valeriabarra)
• Add MPI fix for restarts (#369) (@LenkaNovak)
• Update deps (#371) (@valeriabarra)
• fix BCReader.interpol (#373) (@juliasloan25)
• Update Manifest files (#375) (@valeriabarra)
• CTS and dss (#376) (@kmdeck)
• Update Manifest files again (#378) (@valeriabarra)
• Switch back to default flux type option for interactive runs (#386) (@LenkaNovak)
• Enable DSS for Slab Models (#387) (@LenkaNovak)
• Use time-varying albedo in bucket (#394) (@juliasloan25)
• Use ClimaAtmos new config file interface (#395) (@valeriabarra)
• Enhance AMIP and NCEP paperplots (#399) (@LenkaNovak)
• add aqua tests (#401) (@juliasloan25)
• Bring back Semtner Sea Ice (#403) (@LenkaNovak)
• Add up_deps.jl script (#410) (@valeriabarra)
• split atmos and coupler configs - rebased (#431) (@LenkaNovak)
• use julia v1.9 (#432) (@juliasloan25)
• Revamp ConservationChecker (#436) (@LenkaNovak)
• update dependencies (#438) (@juliasloan25)
• upgrade pipelines to CUDA 12.2 (#439) (@juliasloan25)
• add dss_state! function (#442) (@juliasloan25)
• unify buildkite pipelines (#443) (@juliasloan25)
• Add AMIP debug plots (#452) (@LenkaNovak)
• replace SIC_init with SIC_current (#454) (@juliasloan25)
• move CoupledSim to Interfacer (#455) (@juliasloan25)
• Revamp long run physics specification (#456) (@LenkaNovak)
• CO2 read (#459) (@LenkaNovak)
• update deps (#466) (@juliasloan25)
• Fix CO2 date call (#467) (@LenkaNovak)
• move folders to exp/ClimaCore (#468) (@juliasloan25)
• Generalize callbacks (#483) (@LenkaNovak)
• Enhance long run pipeline with granular testing sets (#491) (@LenkaNovak)
• Run CI on each PR (#493) (@Sbozzolo)
• Use depot (#501) (@Sbozzolo)
• use new package versions (#502) (@Sbozzolo)
• cuda driver, aqua fixes (#505) (@juliasloan25)
• Enable prescribing 3d fields from files (#506) (@LenkaNovak)
• update ClimaCore experiments (#519) (@juliasloan25)
• rm UnPack dep (#522) (@juliasloan25)
• remove OrdinaryDiffEq, DiffEqBase (#526) (@juliasloan25)
• run slabplanet on gpu (#529) (@juliasloan25)
• test Float32 compatibility (#534) (@juliasloan25)
• update dependencies (#535) (@juliasloan25)
• Remove bors.toml (#539) (@Sbozzolo)
• rm modular/ (#541) (@juliasloan25)
• update sea_breeze plots (#544) (@juliasloan25)
• rm atm-ocn-lnd (#548) (@juliasloan25)
• dependency updates (#556) (@juliasloan25)
• use albedo function in config (#561) (@juliasloan25)
• change target atmos config filename (#562) (@szy21)
• rename dt_save_to_disk to dt_save_state_to_disk (#564) (@szy21)
• truncate stacktraces for non-interactive runs (#565) (@juliasloan25)
• dep updates ...