Bump version: 8.2.8 → 8.2.9

Clinical-Genomics · Apr 6, 2022 · 11061bb · 11061bb
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commit 11061bb
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Showing 9 changed files with 10 additions and 11 deletions.
diff --git a/.bumpversion.cfg b/.bumpversion.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 8.2.8
+current_version = 8.2.9
 commit = True
 tag = True
 tag_name = v{new_version}
@@ -19,7 +19,6 @@ tag_name = v{new_version}
 [bumpversion:file:docs/user_guide.rst]
 
 [bumpversion:file:docs/install.rst]
-
 search = {current_version}
 replace = {new_version}
 
diff --git a/BALSAMIC/__init__.py b/BALSAMIC/__init__.py
@@ -1 +1 @@
-__version__ = "8.2.8"
+__version__ = "8.2.9"
diff --git a/BALSAMIC/__version__.py b/BALSAMIC/__version__.py
@@ -1 +1 @@
-__version__ = "8.2.8"
+__version__ = "8.2.9"
diff --git a/BALSAMIC/containers/balsamic/Dockerfile b/BALSAMIC/containers/balsamic/Dockerfile
@@ -6,7 +6,7 @@ LABEL about.documentation="https://balsamic.readthedocs.io/"
 LABEL about.license="MIT License (MIT)"
 LABEL about.maintainer="Hassan Foroughi hassan dot foroughi at scilifelab dot se" 
 LABEL about.description="Bioinformatic analysis pipeline for somatic mutations in cancer"
-LABEL about.version="8.2.8"
+LABEL about.version="8.2.9"
 
 ENV PATH="/opt/conda/bin/:${PATH}"
 ENV MUSL_LOCPATH="/usr/share/i18n/locales/musl"

diff --git a/CITATION.cff b/CITATION.cff
@@ -18,5 +18,5 @@ authors:
 - family-names: "Wirta"
   given-names: "Valtteri"
 title: "BALSAMIC: Bioinformatic Analysis pipeLine for SomAtic MutatIons in Cancer"
-version: v8.2.8
+version: v8.2.9
 url: "https://github.com/Clinical-Genomics/BALSAMIC"
diff --git a/README.rst b/README.rst
@@ -4,7 +4,7 @@
         <a href="https://github.com/Clinical-Genomics/BALSAMIC">
             <img  width=480 src="https://raw.githubusercontent.com/Clinical-Genomics/BALSAMIC/master/BALSAMIC/assets/balsamic_logo.png">
         </a>
-        <h3 align="center">Bioinformatic Analysis pipeLine for SomAtic MutatIons in Cancer (v 8.2.8)</h3>
+        <h3 align="center">Bioinformatic Analysis pipeLine for SomAtic MutatIons in Cancer (v 8.2.9)</h3>
         <h3 align="center">FastQ to Annotated VCF</h3>
     </p>
 
@@ -56,7 +56,7 @@ Snakemake cli given that there is a proper config file created.
 
 .. |docker_latest_build_status| image:: https://github.com/Clinical-Genomics/BALSAMIC/actions/workflows/docker_build_push.yml/badge.svg 
 
-.. |docker_latest_release_status| image:: https://github.com/Clinical-Genomics/BALSAMIC/actions/workflows/docker_build_push_release.yml/badge.svg?tag=v8.2.8 
+.. |docker_latest_release_status| image:: https://github.com/Clinical-Genomics/BALSAMIC/actions/workflows/docker_build_push_release.yml/badge.svg?tag=v8.2.9 
 
 .. |snakemake_badge| image:: https://img.shields.io/badge/snakemake-%E2%89%A55.12.3-brightgreen.svg 
 

diff --git a/docs/bioinfo_softwares.rst b/docs/bioinfo_softwares.rst
@@ -2,7 +2,7 @@
 Workflow
 ========
 
-BALSAMIC ( **version** = 8.2.8 ) uses myriad of tools and softwares to analyze fastq files. This section covers why each
+BALSAMIC ( **version** = 8.2.9 ) uses myriad of tools and softwares to analyze fastq files. This section covers why each
 one is included: usage and parameters, and relevant external links.
 
 

diff --git a/docs/install.rst b/docs/install.rst
@@ -2,7 +2,7 @@
 Installation
 ============
 
-This section describes steps to install BALSAMIC (**version** = 8.2.8)
+This section describes steps to install BALSAMIC (**version** = 8.2.9)
 
 
 

diff --git a/docs/user_guide.rst b/docs/user_guide.rst
@@ -2,7 +2,7 @@
 Short tutorial
 ==============
 
-Here a short tutorial is provided for BALSAMIC (**version** = 8.2.8).
+Here a short tutorial is provided for BALSAMIC (**version** = 8.2.9).
 
 Running a test sample
 ---------------------