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@EI-CoreBioinformatics

EI-CoreBioinformatics

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  1. mikado mikado Public

    Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

    Python 98 18

  2. annotation-workshop-2022 annotation-workshop-2022 Public

    1 5

Repositories

Showing 10 of 23 repositories
  • reat Public

    Robust Eukaryotic Annotation Toolkit

    EI-CoreBioinformatics/reat’s past year of commit activity
    Python 17 MIT 3 6 (1 issue needs help) 1 Updated Nov 11, 2024
  • mikado Public

    Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

    EI-CoreBioinformatics/mikado’s past year of commit activity
    Python 98 LGPL-3.0 18 20 (1 issue needs help) 0 Updated Oct 1, 2024
  • singlecellQC Public
    EI-CoreBioinformatics/singlecellQC’s past year of commit activity
    R 0 MIT 1 1 1 Updated Sep 16, 2024
  • CoassemblyPipeline Public

    Snakemake pipeline for genome coassembly

    EI-CoreBioinformatics/CoassemblyPipeline’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Aug 21, 2024
  • eifunannot Public

    eifunannot - EI AHRD functional annotation pipeline

    EI-CoreBioinformatics/eifunannot’s past year of commit activity
    Python 1 GPL-3.0 0 1 0 Updated Jul 2, 2024
  • Pre_meet-annotation-workshop-2024 Public

    EI Annotation Workshop 2024 (Pre-meet)

    EI-CoreBioinformatics/Pre_meet-annotation-workshop-2024’s past year of commit activity
    0 MIT 0 0 0 Updated Apr 29, 2024
  • annotation-workshop-2024 Public

    EI Annotation Workshop 2024

    EI-CoreBioinformatics/annotation-workshop-2024’s past year of commit activity
    1 MIT 0 0 0 Updated Apr 22, 2024
  • SkimSeqQC Public

    Snakemake pipeline for QC of low-coverage skim-sequencing of G&T seq data

    EI-CoreBioinformatics/SkimSeqQC’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Apr 4, 2024
  • minos Public

    The labyrinth king judges your gene models.

    EI-CoreBioinformatics/minos’s past year of commit activity
    Python 9 LGPL-3.0 1 14 1 Updated Feb 14, 2024
  • eirepeat Public

    eirepeat - EI Repeat Identification pipeline

    EI-CoreBioinformatics/eirepeat’s past year of commit activity
    Python 7 GPL-3.0 2 1 0 Updated Feb 9, 2024
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