rogme 0.2.0

rogme 0.2.0 (2018-07-07)

General improvements

• add input checks to all main functions
• add unit tests for all main functions
• update help
• update README
• add 5 vignettes based on European Journal of Neuroscience 2017 paper examples
• remove redundant functions; make some functions more flexible

New input/output for shift function and difference asymmetry function

• input data frames don't need to be created by mkt1 or mkt2 anymore
• more than 2 groups are allowed: by default first two groups are processed; options to process pairs
• change output to list of data frames
• matching plot functions updated to accept a list of data frames and return a list of ggplot objects
• the new format will make it easier to expand functions or create new ones to handle more complex designs

Add formula input to:

• plot_scat2
• plot_scat2d

Add handling of lists of ggplot objects to:

• plot_sf
• plot_pbsf
• add_sf_lab

New functions:

• plot_hd_links to replace plot_dec_links
• plot_hd_ci to replace plot_dec_ci
• subset_formula_wide

Delete functions:

• deciles
• q1469
• plot_dec_bars
• plot_dec_links
• plot_quartile_bars
• plot_pbsf
• plot_dec_ci
• plot_scat2_sina
• annotate_quartiles
• subset_data2
• plot_kde_rug_dec1
• plot_kde_rug_dec2

EJN alpha release

This alpha release is a companion to this review article:

Beyond differences in means: robust graphical methods to compare two groups in neuroscience
Guillaume A Rousselet, Cyril R Pernet & Rand R Wilcox
European Journal of Neuroscience (in press)

This version of the package was used to produce all the figures in the article, but it hasn't been tested in other contexts.

biorxiv version of the article:
http://biorxiv.org/content/early/2017/03/27/121079

figshare repository with R scripts, data and Matlab code:
https://figshare.com/articles/Modern_graphical_methods_to_compare_two_groups_of_observations/4055970