create patch for interproscan -appl argument

NBISweden · Jan 11, 2024 · a3ceb60 · a3ceb60
1 parent fc17085
commit a3ceb60
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Showing 2 changed files with 93 additions and 43 deletions.
diff --git a/modules.json b/modules.json
@@ -1,46 +1,59 @@
 {
-  "name": "NBIS Genome Annotation Workflow",
-  "homePage": "",
-  "repos": {
-    "https://github.com/nf-core/modules.git": {
-      "modules": {
-        "nf-core": {
-          "blast/makeblastdb": {
-            "branch": "master",
-            "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
-            "installed_by": ["modules"],
-            "patch": "modules/nf-core/blast/makeblastdb/blast-makeblastdb.diff"
-          },
-          "busco": {
-            "branch": "master",
-            "git_sha": "6d6552cb582f56b6101c452e16ee7c23073f91de",
-            "installed_by": ["modules"]
-          },
-          "fastp": {
-            "branch": "master",
-            "git_sha": "d497a4868ace3302016ea8ed4b395072d5e833cd",
-            "installed_by": ["modules"]
-          },
-          "fastqc": {
-            "branch": "master",
-            "git_sha": "9a4517e720bc812e95b56d23d15a1653b6db4f53",
-            "installed_by": ["modules"]
-          },
-          "interproscan": {
-            "branch": "master",
-            "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
-            "installed_by": ["modules"]
-          },
-          "multiqc": {
-            "branch": "master",
-            "git_sha": "a6e11ac655e744f7ebc724be669dd568ffdc0e80",
-            "installed_by": ["modules"]
-          }
+    "name": "NBIS Genome Annotation Workflow",
+    "homePage": "",
+    "repos": {
+        "https://github.com/nf-core/modules.git": {
+            "modules": {
+                "nf-core": {
+                    "blast/makeblastdb": {
+                        "branch": "master",
+                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
+                        "installed_by": [
+                            "modules"
+                        ],
+                        "patch": "modules/nf-core/blast/makeblastdb/blast-makeblastdb.diff"
+                    },
+                    "busco": {
+                        "branch": "master",
+                        "git_sha": "6d6552cb582f56b6101c452e16ee7c23073f91de",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    },
+                    "fastp": {
+                        "branch": "master",
+                        "git_sha": "d497a4868ace3302016ea8ed4b395072d5e833cd",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    },
+                    "fastqc": {
+                        "branch": "master",
+                        "git_sha": "9a4517e720bc812e95b56d23d15a1653b6db4f53",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    },
+                    "interproscan": {
+                        "branch": "master",
+                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
+                        "installed_by": [
+                            "modules"
+                        ],
+                        "patch": "modules/nf-core/interproscan/interproscan.diff"
+                    },
+                    "multiqc": {
+                        "branch": "master",
+                        "git_sha": "a6e11ac655e744f7ebc724be669dd568ffdc0e80",
+                        "installed_by": [
+                            "modules"
+                        ]
+                    }
+                }
+            },
+            "subworkflows": {
+                "nf-core": {}
+            }
         }
-      },
-      "subworkflows": {
-        "nf-core": {}
-      }
     }
-  }
-}
+}
diff --git a/modules/nf-core/interproscan/interproscan.diff b/modules/nf-core/interproscan/interproscan.diff