Lab Meetings QuantGen Group Fall 2020

Where? Zoom (will be distributed)

When? Fridays 11-12

Group's Website

Date	Presenter(s)	Topic(s)	Materials
Fr. Oct 2	Marco Lopez-Cruz	Accounting for Group-Specific Allele Effects and Admixture in Genomic Predictions	Rio et al (Genetics, 2020)
Fr. Oct 9
Fr. Oct 16	Agustin	An intravascular magnetic wire for the high-throughput retrieval of circulating tumour cells in vivo	link
Fr. Oct 23	Alexa	Overview of local admixture softwares
Fr. Oct 30	Harold Wu	Multi-trait Genome-Wide Analyses of the Brain Imaging Phenotypes in UK Biobank	link
Fr. Nov 6	Guanqi Lu	Pan-cancer study detects genetic risk variants and shared genetic basis in two large cohorts	link
Fr. Nov 13	Filipe	Reconstruction of Networks with Direct and Indirect Genetic Effects	Kruijer et al (Genetics, 2020)
Fr. Nov 20	Fernando	False Discovery Rate Control and Forward Selection	link
Fr. Dec 4	Sikta	Controlling the false discovery rate via knockoffs	link
Fr. Dec 11	JP Steibel	Behavioral phenomics for pig breeding and for pig farming	Article1 Article2 Article3

Publications that may be of interest

(feel free to add items to the wishlist)

Efron (JASA, 2019) Prediction, Estimation, and Attribution (Discussion)

Sun and Lin (JASAS, 2020) Gene Set testing in GWAS

Kerin and Marchini (AJHG, 2020) Inferring Gene-by-Environment Interactions with a Bayesian Whole-Genome Regression Model

Rio et al (Genetics, 2020) Allele-specific effects in admixed populations

Small and Arnosti (Genetics, 2020) Transcriptional Enhancers in Drosophila

Wu (Genetics 2020) Multi-trait Genome-Wide analysis of Brain imaging data from the UK-Biobank

Kruiker et al (Genetics 2020) Reconstruction of Networks with Direct and Indirect Genetic Effects

Pierce et al. (Nat. Gen., 2020)

Rashking et al. (Nat. Comm, 2020) Pan-cancer study detects genetic risk variants and shared genetic basis in two large cohorts

Benjamini & Gavrilov (Ann. Appl. Stat. 2009) FDR control in Forward Regression

Bi et al. (AJHG, 2020) A Fast and Accurate Method for Genome-Wide Time-to-Event Data Analysis and Its Application to UK Biobank