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🆕Multichannel Image Reading #825

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🆕Multichannel Image Reading #825

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Commits on Jan 29, 2024

  1. UPD: fix bound

    @vqdang
    vqdang committed Jan 29, 2024
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Commits on Feb 2, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Feb 2, 2024
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  2. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Feb 2, 2024
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Commits on Feb 16, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Feb 16, 2024
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Commits on Feb 21, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Feb 21, 2024
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Commits on Mar 1, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Mar 1, 2024
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Commits on Mar 15, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Mar 15, 2024
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Commits on Mar 19, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Mar 19, 2024
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Commits on Apr 16, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Apr 16, 2024
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Commits on Apr 26, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Apr 26, 2024
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Commits on Apr 29, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Apr 29, 2024
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Commits on May 13, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @Abdol
    Abdol authored May 13, 2024
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  2. ✅ Add test

    Abdol A committed May 13, 2024
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Commits on May 14, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @Abdol
    Abdol authored May 14, 2024
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Commits on Jun 7, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @Abdol
    Abdol authored Jun 7, 2024
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Commits on Jun 14, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Jun 14, 2024
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Commits on Jun 21, 2024

  1. Merge branch 'develop' into bugfix-tiffwsireader-readbounds

    @shaneahmed
    shaneahmed authored Jun 21, 2024
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  2. initial draft multichannel reading

    @measty
    measty committed Jun 21, 2024
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  3. deepsource

    @measty
    measty committed Jun 21, 2024
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Commits on Jun 24, 2024

  1. make .tif be recognised same as .tiff

    @measty
    measty committed Jun 24, 2024
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Commits on Jun 26, 2024

  1. fix read_rect

    @measty
    measty committed Jun 26, 2024
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  2. optimizations

    @measty
    measty committed Jun 26, 2024
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  3. fix typo

    @measty
    measty committed Jun 26, 2024
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Commits on Jul 2, 2024

  1. get colors from metadata if poss.

    @measty
    measty committed Jul 2, 2024
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  2. deepsource

    @measty
    measty committed Jul 2, 2024
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Commits on Jul 5, 2024

  1. ✅ Adding test for mutli_channel visualisation

    @behnazelhaminia
    behnazelhaminia committed Jul 5, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Jul 5, 2024
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  3. replace depreciated funcTickFormatter

    @measty
    measty committed Jul 5, 2024
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  4. Merge branch 'multichannel-reading' of https://github.com/TissueImage… 

    …Analytics/tiatoolbox into multichannel-reading
    @measty
    measty committed Jul 5, 2024
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  5. ✅ Adding test for mutli_channel visualisation

    @behnazelhaminia
    behnazelhaminia committed Jul 5, 2024
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Commits on Aug 7, 2024

  1. drop background autofluorescence channel if appropriate

    @measty
    measty committed Aug 7, 2024
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  2. Merge branch 'multichannel-reading' of https://github.com/TissueImage… 

    …Analytics/tiatoolbox into multichannel-reading
    @measty
    measty committed Aug 7, 2024
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  3. Merge branch 'develop' of https://github.com/TissueImageAnalytics/tia… 

    …toolbox into multichannel-reading
    @measty
    measty committed Aug 7, 2024
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  4. remove a print

    @measty
    measty committed Aug 7, 2024
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Commits on Aug 9, 2024

  1. ✅ Assert shape and interpolation

    @behnazelhaminia
    behnazelhaminia committed Aug 9, 2024
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  2. ✅ Test for multichannel visualisation

    @behnazelhaminia
    behnazelhaminia committed Aug 9, 2024
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  3. Merge remote-tracking branch 'origin/multichannel-reading' into multi… 

    …channel-reading
    @behnazelhaminia
    behnazelhaminia committed Aug 9, 2024
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  4. ✅ Test for multichannel visualisation

    @behnazelhaminia
    behnazelhaminia committed Aug 9, 2024
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  5. Update remote_samples.yaml

    @behnazelhaminia
    behnazelhaminia authored Aug 9, 2024
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  6. Merge branch 'develop' into multichannel-reading

    @shaneahmed
    shaneahmed authored Aug 9, 2024
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Commits on Aug 21, 2024

  1. first channel selector draft

    @measty
    measty committed Aug 21, 2024
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  2. Merge branch 'multichannel-reading' of https://github.com/TissueImage… 

    …Analytics/tiatoolbox into multichannel-reading
    @measty
    measty committed Aug 21, 2024
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  3. Merge branch 'multichannel-reading' of https://github.com/TissueImage… 

    …Analytics/tiatoolbox into multichannel-reading
    @measty
    measty committed Aug 21, 2024
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Commits on Aug 22, 2024

  1. multichannel ui update

    @measty
    measty committed Aug 22, 2024
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  2. Merge branch 'develop' of https://github.com/TissueImageAnalytics/tia… 

    …toolbox into multichannel-reading
    @measty
    measty committed Aug 22, 2024
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  3. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 22, 2024
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  4. fix a test

    @measty
    measty committed Aug 22, 2024
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  5. Merge branch 'multichannel-reading' of https://github.com/TissueImage… 

    …Analytics/tiatoolbox into multichannel-reading
    @measty
    measty committed Aug 22, 2024
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Commits on Aug 25, 2024

  1. more efficient channel select ui

    @measty
    measty committed Aug 25, 2024
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Commits on Aug 29, 2024

  1. multichannel ui layout tweak

    @measty
    measty committed Aug 29, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 29, 2024
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Commits on Sep 20, 2024

  1. Merge branch 'develop' into multichannel-reading

    @shaneahmed
    shaneahmed authored Sep 20, 2024
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Commits on Sep 21, 2024

  1. robustify level sort

    @measty
    measty committed Sep 21, 2024
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  2. Merge branch 'multichannel-reading' of https://github.com/TissueImage… 

    …Analytics/tiatoolbox into multichannel-reading
    @measty
    measty committed Sep 21, 2024
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  3. Merge branch 'develop' of https://github.com/TissueImageAnalytics/tia… 

    …toolbox into multichannel-reading
    @measty
    measty committed Sep 21, 2024
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Commits on Sep 26, 2024

  1. Merge remote-tracking branch 'origin/multichannel-reading' into multi… 

    …channel-reading

# Conflicts:
#	tests/test_wsireader.py
    @behnazelhaminia
    behnazelhaminia committed Sep 26, 2024
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  2. ✅ Adding small multiplxed image

    @behnazelhaminia
    behnazelhaminia committed Sep 26, 2024
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Commits on Oct 4, 2024

  1. Merge branch 'develop' into multichannel-reading

    @shaneahmed
    shaneahmed authored Oct 4, 2024
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