R script to extract the following information from the bio.tools content and the EDAM ontology
- Links between data and format from tool annotations in bio.tools, given by EDAM data+format combinations in input/output functions
- Already given links in EDAM given by the
is_format_of
attribute - Parent terms of EDAM formats
There at least two aims:
- Annotate corresponding data term(s) to each EDAM format
- Identify and remove data without format
- Widen concept to include
has_topic
and other relationships between EDAM