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Release 1.2.0
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@cagaser cagaser released this 16 Jul 14:11
· 116 commits to develop since this release
v1.2.0
5023d44
  • Remove GRIDSS from the pipeline.
  • Exclude GRIDSS from SURVIVOR merging: SVs were only defined as BNDs in GRIDSS.
  • Optional filtering of missing and hom-ref genotypes.
  • Optional filtering of FP deletions and duplications.
  • Add DUPHOLD: annotate SVs with depth values.
  • Make bcftools indexing optional.
  • Structural-variantcalling pipeline: add sorting and change id.
  • Added GRIDSS sv caller
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