ci: skip aston parser test on CRAN #320
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [main, master, dev] | |
| pull_request: | |
| branches: [main, master, dev] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macos-latest, r: 'release'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel-1'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: 3.9 | |
| - name: Install dependencies | |
| run: | | |
| install.packages(c("remotes", "rcmdcheck")) | |
| remotes::install_deps(dependencies = TRUE) | |
| install.packages(c("ncdf4")) | |
| install.packages("chromConverterExtraTests", repos = "https://ethanbass.github.io/drat/") | |
| reticulate::install_miniconda() | |
| reticulate::conda_create('r-reticulate', packages = c('python==3.9', 'numpy', 'scipy', 'pandas')) | |
| reticulate::conda_install('r-reticulate', packages = c('aston', "olefile", "rainbow-api"), pip=TRUE) | |
| shell: Rscript {0} | |
| - if: runner.os == 'macOS' | |
| run: echo "options(reticulate.conda_binary = reticulate:::miniconda_conda())" >> .Rprofile | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true |