peach v2.0.0
·
1164 commits
to master
since this release
Functional:
- Significantly change formats of input and output files.
- Handle overlapping genes correctly.
- Allow overlapping variants with different ref bases (deletions and insertions at the same location, overlapping SNVs and MNVs, etc.).
- Remove requirement to include both V37 and V38 coordinates in the resource files when calling on a V37 reference genome.
Technical:
- Converted from Python to Java.