Releases: hubmapconsortium/ccf-asct-reporter
Releases · hubmapconsortium/ccf-asct-reporter
2.7.0
2.5.0
2.5.0 - 2022-06-17
- Added support for selecting CCF Release v1.2 tables (Published June 2022)
- Too many changes to enumerate here. See comparison
2.4.0
2.4.0 - 2021-08-06
Added in 2.4.0
- Comparison feature now uses both ID and Name for node comparison
- AS Count in reports no longer include Body
- Added ASCT+B API Documentation page
- Added CSV file upload capability to Playground
- Refactored routes into new files in ASCTB API
2.3.0
2.3.0 - 2021-07-22
Added in 2.3.0
- Added export to JSON graph to the ASCT+B API and UI (export menu)
- Better routes for documentation pages (/docs/1 => /docs/about)
- Added Select All button to the search dropdown
- Added Ontology ID and label to the Body node
- Upgraded dependencies to Angular 12
- Added linting to the ASCT+B API
- Migrated from tslint to eslint
- Bug fixes and code cleanup
2.2.0
2.2.0 - 2021-07-02
Added in 2.2.0
- Multiple levels of cell types (
CT
) are now supported in the Table Format and User Interface. Note: The Cell Type hierarchy is currently flattened in the visualization; future work includes visualizing the hierarchical structure. - Five biomarker types are now supported in the Table format and User Interface: Genes (
BGene
), Proteins (BProtein
), Lipids (BLipid
), Metabolites (BMetabolites
) and Proteoforms (BProteoform
) - CSV URLs can now be used in the organ dropdown, compare, and playground features
- Clicking on a term label now fetches a description and IRI link for terms across UBERON, FMA, CL, and HGNC ontologies.
2.1.0
NOTES
- Added FMA ontology term support
- Added more biomarker types (proteins and lipids)
- Added shapes to biomarkers in the visualization
- Improved parsing of the ASCT+B data tables
- Minor UI improvements / bug fixes
- Counts by organ are shown in the report tab when all organs are selected
- Added discrepency labels
- New Demo Video
- Alert users when they add a Google Sheets Share URL instead of the Browser URL
- Fixed a regression in the ASCT+B API homepage
- Duplicate ID's can be highlighed when ID duplicates toggle is on
2.0.0
Notes
- Redesign of the UI
- Usability refactoring through user testing
- Updated architecture with state manager
- Brand new playground feature
- Increased interactivity of the graph with into sheets and DOI
- Filtering biomarkers based on their protein type
- Improved google analytics
- Updated legend to show the values of the uploaded compare sheets
- Revamped report generator
- Documentation added in the Reporter
v1.1.0
Added
- Organ selector from the Home Page Button
- HGNC Links for biomarkers (for heart and spleen).
- Version selector for the data.
- Compare Sheet feature.
- Dashed links for nodes with multi-parent nodes.
- Full Screen Mode
- Visualization Control
- Search feature
- Search Filters
- Integrated Google Analytics
Changed
- Vega config to separate folders
- Biomarker field in the Report.
- Remove character limit of names on hover/click.
- Reduce opacity of nodes not currently selected in the visualization.
- Text from 'See Debug Log' to 'Multi-Parent Node'
- Brain Organ Sheet Link
Fixed
- Error when shifting from Indented list to tree vis
- Dropdown names for the menu on the navbar in mobile mode.
- Mat-tab body text left aligned.
- Error handling when visualization failed to render.
- Compare sheets header count from 1 to 11.
- XLSX file generation to make it more efficient and robust when any of the structures are not present.
- Dialogs are now independent and are not centrally controlled.
- Snackbar messages
- Data Miner to handle links that are private and respond with appropriate messages.
v1.0.0
- Added ASCT+B Data Miner
- Refactored Code
- Update documentation
Update 7.30.2020
- Lung organ table is added to the Reporter.
- The algorithm now skips the first 11 rows. This will change in the future to the first 10 rows, once the headers are standardized.
- Tooltip shows more data, namely - indegree, outdegree and Uberon/Link if present.
- Fixed background color of the vis after download.
- Added sub structure column for Kidney that was previously missing.
- Added responsiveness to the navigation drawer to take up the full width when screen is smaller.
- Added responsiveness to the toolbar to collapse to options width of the screen is smaller.