Exclude non-modeled residues from scheme table #439
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| name: build | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-22.04] | |
| python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
| include: | |
| - os: ubuntu-20.04 | |
| python-version: '3.6' | |
| - os: macos-latest | |
| python-version: '3.10' | |
| env: | |
| PY2: ${{ startsWith(matrix.python-version, 2) && 'on' || 'off' }} | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies (Mac) | |
| if: matrix.os == 'macos-latest' | |
| run: | | |
| brew install swig | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| if [ "${{ env.PY2 }}" == "on" ]; then | |
| pip install coverage pytest-cov flake8 setuptools | |
| else | |
| pip install coverage pytest-cov flake8 setuptools pep8-naming | |
| fi | |
| - name: Test | |
| run: | | |
| # Test with Python tokenizer | |
| py.test --cov=ihm --cov-branch -v . | |
| CFLAGS="-coverage" python setup.py build_ext --inplace -t build | |
| # Test with C tokenizer | |
| py.test --cov=ihm --cov-branch --cov-report=xml --cov-append -v . | |
| if [ "${{ env.PY2 }}" == "on" ]; then | |
| flake8 --ignore E402,W503,W504 --exclude util/make-mmcif.py | |
| else | |
| flake8 --ignore E402,W503,W504,N816 | |
| fi | |
| - uses: codecov/codecov-action@v4 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |