Covid project for the Systems Biology course. The aim of this project is drug repositioning for this disease.
This folder contains the networks for the Heart, Lung, Kidney and Spleen. It is divided in two folders. "All_genes" contains the analyzed networks with all the genes from the differential expression. "Immune_pathways" folder contains the network using only immune related pathways.
This folder contains the differential expression tables which include the log2FoldChange and adjusted p-value.
This file includes all the immune related pathways and their corresponding genes fetched from the KEGG Mus musculus database.
This folder includes the networks CSV files. They contain the Source Node, Target node and the score of their predicted interaction.
Contains the raw counts and the predicted network from MouseNetV2.
Contains the pathway analysis using all the genes from the differential expression analysis using the WebGestalt platform with the KEGG Database