MOLGENIS Distribution

The empty MOLGENIS Distribution, fork this and create your own MOLGENIS Application

Developing your own

Generate generate your own in three steps:

1. Clone the MOLGENIS generator and an empty distro

   git clone https://www.github.com/molgenis/molgenis.git git clone https://www.github.com/molgenis/molgenis_distro.git cd molgenis_distro

2. Model what you want for your experiment in a simple XML file example db, example ui

   molgenis.properties molgenis_db.xml molgenis_ui.xml

3. Run the MOLGENIS generator, after that you're able to use your web application.

(Eclipse) MOLGENIS Distro

• Edit molgenis_db.xml and molgenis_ui.xml to (re)model your application
• Run 'handwritten/java/MolgenisGenerate' to (re)generate the new software
• Run 'handwritten/java/MolgenisUpdateDatabase' to update the database with the new schema
• Run 'handwritten/java/MolgenisExtractModel' to extract a MOLGENIS model from an existing database (- Edit molgenis.properties to change the database connection settings)

How to view the results

• Re-compile your project (in Eclipse, right-mouse button on molgenis_distro and then 'refresh'
• Run on web server (in Eclipse, right-click run on Server)