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Replace supplies and drains relations by more specific relations #3426

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Commits on Nov 14, 2024

  1. Replace 'supplies' and 'drains' by more specific relations.

    RO now provides 'vessel supplies blood to' (RO:0020101) as a more
    specific variant of 'supplies' (RO:0002178). The new relation is
    domain-restricted to 'blood vessel' (UBERON:0001981). We use that new
    relation wherever 'supplies' was used to qualify a blood vessel.
    
    Likewise for 'vessel drains blood from' (RO:0020102), which is a more
    specific variant of 'drains' (RO:0002179).
    
    Recently introduced patterns for arteries and veins (#3288) already use
    the more specific relations.
    
    No longer using 'drains' and 'supplies' wherever a blood vessel is
    involved means that we no longer need to inject our own domain and range
    restrictions to those relations, so we remove those injections as well
    (#2453).
    gouttegd committed Nov 14, 2024
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  2. Make 'supraorbital artery' supply blood to 'mucosa of frontal sinus'.

    'supraorbital artery' (UBERON:0015160) supplies blood to the 'frontal
    sinus' (UBERON:0001760), but 'frontal sinus' represents an immaterial
    anatomical cavity, and is therefore incompatible with the range
    restriction of the 'vessel supplies blood to' (RO:0020101) relation.
    
    We replace the object of that relation to 'mucosa of frontal sinus' (a
    material anatomical entity) instead.
    gouttegd committed Nov 14, 2024
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  3. Add 'intercostal element'.

    The 'intercostal vein' (UBERON:0012197) and 'intercostal artery'
    (UBERON:0005612) are said to drain and supply blood from and to the
    'intercostal space' (UBERON:0012198).
    
    In both cases, this violates the range restriction of the 'vessel drains
    blood from' (RO:0020102) and 'vessel supplies blood to' (RO:0020101)
    relations, because 'intercostal space' is an immaterial anatomical
    entity.
    
    We create a new term 'intercostal element' intended to refer to any
    anatomical structure located within an intercostal space (e.g.
    intercostal muscles, intercostal lymph nodes), and use the new term to
    replace 'intercostal space' in the relationships with 'intercostal vein'
    and 'intercostal arteries'.
    gouttegd committed Nov 14, 2024
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Commits on Nov 19, 2024

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