feature/pvc Update K8s Storage
#528
Workflow file for this run
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| name: Nextflow Test | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| jobs: | |
| build: | |
| uses: ./.github/workflows/build.yml | |
| nextflow: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Download Funnel | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: funnel | |
| - name: Start Funnel | |
| run: | | |
| chmod +x ./funnel | |
| ./funnel server --LocalStorage.AllowedDirs $HOME run & | |
| - name: Install Nextflow | |
| run: | | |
| git clone https://github.com/nextflow-io/nextflow | |
| cd nextflow | |
| make compile | |
| - name: Install nf-canary and GA4GH-TES plugin | |
| run: | | |
| git clone https://github.com/seqeralabs/nf-canary | |
| cd nf-canary | |
| cat <<EOF >> nextflow.config | |
| plugins { | |
| id 'nf-ga4gh' | |
| } | |
| process.executor = 'tes' | |
| tes.endpoint = 'http://localhost:8000' | |
| EOF | |
| - name: Run nf-canary tests | |
| run: | | |
| ./nextflow/nextflow run nf-canary/main.nf |