Helms Group - Saarland University

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4 repositories

BEclear
Public
Correction of batch effects in DNA methylation data
methylation missing-data dna-methylation stochastic-gradient-descent batch-effects rpackage bioconductor-package missing-values latent-factor-model
R
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GNU General Public License v3.0
•0•4•10•0•Updated Apr 6, 2023Apr 6, 2023
BEclear-CL
Public
Correction of batch effects with BEclear as a command line tool
methylation missing-data command-line-tool stochastic-gradient-descent batch-effects missing-values latent-factor-model
R
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GNU General Public License v3.0
•0•1•0•0•Updated Apr 6, 2023Apr 6, 2023
ProPores2
Public
Command line tool for identifying pores, cavities and tunnels in proteins, axis determination and opening gates between neighbouring pores.
pore-identification gate-opening axis-trace
C++
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GNU General Public License v3.0
•0•3•3•0•Updated Dec 3, 2021Dec 3, 2021
MutaNET
Public
Automated analysis tool for mutations in promoters, transcription factor binding sites, coding regions and protein domains in the context of gene regulatory networks.
gui transcription-factor-binding-site pipeline ngs mutations converters automated-analysis protein-domains mutation-analysis ngs-pipeline
Python
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GNU General Public License v3.0
•1•0•0•0•Updated Sep 7, 2021Sep 7, 2021