Pinned Loading

1. Rseb Rseb Public

   An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.

   R 1

2. SPACCa SPACCa Public

   Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples

   Python

3. DEprot DEprot Public

   Package to impute, normalize and perform differential analyses on proteomics data (LFQ-based)

   R

4. snakeATAC snakeATAC Public

   Snakemake pipeline for analysis and normalization of ATAC-seq data starting from fastq.gz files.

   Python 2

5. ChIP_Zwart ChIP_Zwart Public

   ChIP-seq pipeline specific for the Zwart lab

   Python

6. snHiC snHiC Public

   Snakemake pipeline for analysis and normalization of Hi-C data starting from fastq.gz files. It includes the possibility to perform grouped analyses, TAD, loops and stripes detections, as well as d…

   Python 3