peak-annotation

Here are 3 public repositories matching this topic...

OpenOmics / cfChIP-seek

cell-free ChIP-seq pipeline

quality-control snakemake chip-seq cell-free-dna peak-calling peak-annotation cell-type-deconvolution

Updated Feb 7, 2024
Python

Comprehensive analysis pipeline for ATAC-seq data including QC, alignment, peak calling, annotation, motif analysis, and gene enrichment. Delivers key insights and reproducible results for chromatin accessibility studies.

motif-analysis peak-calling chromatin-accessibiity atac-seq-pipeline peak-annotation

Updated May 14, 2024
HTML

lakhanp1 / markPeaks

Star

Genomic regions (e.g ChIPseq peaks) annotation with TxDB object

annotation chipseq peak-annotation

Updated May 4, 2021
R

Improve this page

Add a description, image, and links to the peak-annotation topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the peak-annotation topic, visit your repo's landing page and select "manage topics."

Learn more

Provide feedback

Saved searches

Use saved searches to filter your results more quickly