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14 public repositories
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MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of MS2-cleavable crosslinkers from MS2 and MS3 spectra.
Export MS Annika crosslink results to different formats.
Updated
Jun 21, 2024
Python
Extensions for better usability of the cross-linking tool MaXLinker.
Updated
Sep 4, 2023
Python
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
Updated
Sep 4, 2023
Python
List of all available extensions for our cross-linking search engine MS Annika.
A script to merge and optionally validate several MS Annika search results.
Updated
Jan 24, 2024
Python
Short talk presentation, poster and abstract for APMRS-CEEPC 2024
Extensions to use the cross-linking tool Scout with other software.
Updated
Oct 18, 2023
Python
Results and Evaluation of the MS3 Search Algorithm of MS Annika.
Updated
Oct 2, 2023
Jupyter Notebook
Helper scripts for crosslink analysis.
Updated
Sep 4, 2023
Python
Generate a spectral library for Spectronaut from MS Annika results.
Updated
Nov 15, 2024
Python
A script and functions to group and validate MS Annika results.
Updated
Jun 19, 2024
Python
Repository containing scripts used for the analysis and visualization of the results of the MS Annika 3.0 non-cleavable crosslink search.
Updated
Nov 14, 2024
HTML
Short Talk Presentation for APMRS 2022
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