v1.5.1

What's Changed

Fixes

• Remove SFLD hits support due to an update to kronos cluster 25bc78c

HPC changes

• Update cluster config for kronos cluster 9677f8d

Full Changelog: v1.5.0...v1.5.1

v1.5.0

What's Changed

Features

New scripts added for internal functional annotation releases

• Script to parse tabular blast output - parse_blast.py 249e518
• Script to create functional annotation summary file - create_functional_annotation.py 249e518
• Script to add functional description to release GFF3 - add_description_to_annotation_GFF3.py 7a3233b

HPC changes

• Added --keep-going option to enable run of independent jobs if a job fails 14f826a
• Updated run config to use /ei/public location to use the resources sitewide be2fe2f
• Increased default number of cluster jobs to 200 3de13c2
• Updated cluster config f74c92e

Updated README and added WiKi pages

Full Changelog: v1.4.0...v1.5.0

v1.4.0

What's Changed

Features

New download_from_uniprot script

• You can download Uniprot database as well as exclude a taxon id, add manually curated isoforms, and filter database for incomplete sequences.
• add script to download data from UniProt download_from_uniprot.py 17d0796
• add option to exclude taxon id from UniProt download: download_from_uniprot.py e03608f
• add feature to include manually curated isoform sequences - download_from_uniprot.py a7e3c64

Exclude nodes, use the updated cluster_config.json file

• add feature to exclude HPC nodes - cluster_config.json 798c198

Full Changelog: v1.3.0...v1.4.0

v1.3.0

Full Changelog: v1.2.1...v1.3.0