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start working on a simulation module #331

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start working on a simulation module

start working on a simulation module #331

Triggered via push November 8, 2023 10:36
@jeffersonfpariljeffersonfparil
pushed f36cf10
main
Status Success
Total duration 26m 25s
Artifacts –

rust.yml

on: push
Compile
1m 20s
Compile
Matrix: Test
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51 warnings
Compile
The following actions uses node12 which is deprecated and will be forced to run on node16: ATiltedTree/setup-rust@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Compile: src/imputation/adaptive_ld_knn_imputation.rs#L7
unused import: `std::time::Instant`
Compile: src/gp/penalise.rs#L5
unused import: `ndarray_linalg`
Compile: src/imputation/adaptive_ld_knn_imputation.rs#L80
unused variable: `x`
Compile: src/imputation/filtering_missing.rs#L20
unused variable: `p`
Compile: src/imputation/filtering_missing.rs#L23
variable `n_missing` is assigned to, but never used
Compile: src/gp/penalise.rs#L14
function `soft_thresholding` is never used
Compile: src/gp/penalise.rs#L24
function `coordinate_descent` is never used
Compile: src/imputation/adaptive_ld_knn_imputation.rs#L371
function `impute_aLDkNN` should have a snake case name
Compile: src/popgen/gudmc.rs#L68
variable `recombination_rate_cM_per_Mb` should have a snake case name
Compile
`poolgen` (bin "poolgen") generated 9 warnings (run `cargo fix --bin "poolgen"` to apply 3 suggestions)
Test (windows-latest, stable)
The following actions uses node12 which is deprecated and will be forced to run on node16: ATiltedTree/setup-rust@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L7
unused import: `std::time::Instant`
Test (windows-latest, stable): src/gp/penalise.rs#L5
unused import: `ndarray_linalg`
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L80
unused variable: `x`
Test (windows-latest, stable): src/imputation/filtering_missing.rs#L20
unused variable: `p`
Test (windows-latest, stable): src/imputation/filtering_missing.rs#L23
variable `n_missing` is assigned to, but never used
Test (windows-latest, stable): src/gp/penalise.rs#L14
function `soft_thresholding` is never used
Test (windows-latest, stable): src/gp/penalise.rs#L24
function `coordinate_descent` is never used
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L371
function `impute_aLDkNN` should have a snake case name
Test (windows-latest, stable): src/popgen/gudmc.rs#L68
variable `recombination_rate_cM_per_Mb` should have a snake case name
Test (windows-latest, stable)
`poolgen` (bin "poolgen") generated 9 warnings (run `cargo fix --bin "poolgen"` to apply 3 suggestions)
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L7
unused import: `std::time::Instant`
Test (windows-latest, stable): src/gp/penalise.rs#L5
unused import: `ndarray_linalg`
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L80
unused variable: `x`
Test (windows-latest, stable): src/imputation/filtering_missing.rs#L20
unused variable: `p`
Test (windows-latest, stable): src/imputation/filtering_missing.rs#L23
variable `n_missing` is assigned to, but never used
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L371
function `impute_aLDkNN` should have a snake case name
Test (windows-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L484
function `test_impute_aLDkNN` should have a snake case name
Test (windows-latest, stable): src/popgen/gudmc.rs#L68
variable `recombination_rate_cM_per_Mb` should have a snake case name
Test (windows-latest, stable)
`poolgen` (bin "poolgen" test) generated 8 warnings (run `cargo fix --bin "poolgen" --tests` to apply 3 suggestions)
Test (ubuntu-latest, stable)
The following actions uses node12 which is deprecated and will be forced to run on node16: ATiltedTree/setup-rust@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L7
unused import: `std::time::Instant`
Test (ubuntu-latest, stable): src/gp/penalise.rs#L5
unused import: `ndarray_linalg`
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L80
unused variable: `x`
Test (ubuntu-latest, stable): src/imputation/filtering_missing.rs#L20
unused variable: `p`
Test (ubuntu-latest, stable): src/imputation/filtering_missing.rs#L23
variable `n_missing` is assigned to, but never used
Test (ubuntu-latest, stable): src/gp/penalise.rs#L14
function `soft_thresholding` is never used
Test (ubuntu-latest, stable): src/gp/penalise.rs#L24
function `coordinate_descent` is never used
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L371
function `impute_aLDkNN` should have a snake case name
Test (ubuntu-latest, stable): src/popgen/gudmc.rs#L68
variable `recombination_rate_cM_per_Mb` should have a snake case name
Test (ubuntu-latest, stable)
`poolgen` (bin "poolgen") generated 9 warnings (run `cargo fix --bin "poolgen"` to apply 3 suggestions)
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L7
unused import: `std::time::Instant`
Test (ubuntu-latest, stable): src/gp/penalise.rs#L5
unused import: `ndarray_linalg`
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L80
unused variable: `x`
Test (ubuntu-latest, stable): src/imputation/filtering_missing.rs#L20
unused variable: `p`
Test (ubuntu-latest, stable): src/imputation/filtering_missing.rs#L23
variable `n_missing` is assigned to, but never used
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L371
function `impute_aLDkNN` should have a snake case name
Test (ubuntu-latest, stable): src/imputation/adaptive_ld_knn_imputation.rs#L484
function `test_impute_aLDkNN` should have a snake case name
Test (ubuntu-latest, stable): src/popgen/gudmc.rs#L68
variable `recombination_rate_cM_per_Mb` should have a snake case name
Test (ubuntu-latest, stable)
`poolgen` (bin "poolgen" test) generated 8 warnings (run `cargo fix --bin "poolgen" --tests` to apply 3 suggestions)