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Scaling ortholearners using Ray #800

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14 changes: 7 additions & 7 deletions .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -114,12 +114,12 @@ jobs:
kind: [except-customer-scenarios, customer-scenarios]
include:
- kind: "except-customer-scenarios"
extras: "[tf,plt]"
extras: "[tf,plt,ray]"
pattern: "(?!CustomerScenarios)"
install_graphviz: true
version: '3.8' # no supported version of tensorflow for 3.9
- kind: "customer-scenarios"
extras: "[plt,dowhy]"
extras: "[plt,dowhy,ray]"
pattern: "CustomerScenarios"
version: '3.9'
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Unless you make any changes to the notebooks to take advantage of the new ray functionality, these changes should not be necessary.

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Fixed in latest commit

install_graphviz: false
Expand Down Expand Up @@ -193,19 +193,19 @@ jobs:
include:
- kind: serial
opts: '-m "serial" -n 1'
extras: "[tf,plt]"
extras: "[tf,plt,ray]"
- kind: other
opts: '-m "cate_api" -n auto'
extras: "[tf,plt]"
extras: "[tf,plt,ray]"
- kind: dml
opts: '-m "dml"'
extras: "[tf,plt]"
extras: "[tf,plt,ray]"
- kind: main
opts: '-m "not (notebook or automl or dml or serial or cate_api or treatment_featurization)" -n 2'
extras: "[tf,plt,dowhy]"
extras: "[tf,plt,dowhy,ray]"
- kind: treatment
opts: '-m "treatment_featurization" -n auto'
extras: "[tf,plt]"
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I believe ray only needs to be added to the main test kind, since that is where the test_ortho_learner tests are run.

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Fixed in latest commit

extras: "[tf,plt,ray]"
fail-fast: false
runs-on: ${{ matrix.os }}
steps:
Expand Down
174 changes: 139 additions & 35 deletions econml/_ortho_learner.py
Original file line number Diff line number Diff line change
Expand Up @@ -47,7 +47,67 @@ class in this module implements the general logic in a very versatile way
inverse_onehot, jacify_featurizer, ndim, reshape, shape, transpose)


def _crossfit(model, folds, *args, **kwargs):
def _fit_fold(model, train_idxs, test_idxs, calculate_scores, args, kwargs):
"""
Fits a single model on the training data and calculates the nuisance value on the test data.
model: object
An object that supports fit and predict. Fit must accept all the args
and the keyword arguments kwargs. Similarly predict must all accept
all the args as arguments and kwards as keyword arguments. The fit
function estimates a model of the nuisance function, based on the input
data to fit. Predict evaluates the fitted nuisance function on the input
data to predict.

train_idxs (array-like): Indices for the training data.
test_idxs (array-like): Indices for the test data.
calculate_scores (bool): Whether to calculate scores after fitting.

args : a sequence of (numpy matrices or None)
Each matrix is a data variable whose first index corresponds to a sample
kwargs : a sequence of key-value args, with values being (numpy matrices or None)
Each keyword argument is of the form Var=x, with x a numpy array. Each
of these arrays are data variables. The model fit and predict will be
called with signature: `model.fit(*args, **kwargs)` and
`model.predict(*args, **kwargs)`. Key-value arguments that have value
None, are ommitted from the two calls. So all the args and the non None
kwargs variables must be part of the models signature.
Returns:
--------
-Tuple containing:
nuisance_temp (tuple): Predictions or values of interest from the model.
fitted_model: The fitted model after training.
test_idxs (array-like): Indices of the test data.
score_temp (tuple or None): Scores calculated after fitting if `calculate_scores` is True, otherwise None.
"""
model = clone(model, safe=False)

if len(np.intersect1d(train_idxs, test_idxs)) > 0:
raise AttributeError(
"Invalid crossfitting fold structure. Train and test indices of each fold must be disjoint. {},{}".format(
train_idxs, test_idxs))

args_train = tuple(var[train_idxs] if var is not None else None for var in args)
args_test = tuple(var[test_idxs] if var is not None else None for var in args)

kwargs_train = {key: var[train_idxs] for key, var in kwargs.items()}
kwargs_test = {key: var[test_idxs] for key, var in kwargs.items()}

model.fit(*args_train, **kwargs_train)
nuisance_temp = model.predict(*args_test, **kwargs_test)

if not isinstance(nuisance_temp, tuple):
nuisance_temp = (nuisance_temp,)

if calculate_scores:
score_temp = model.score(*args_test, **kwargs_test)

if not isinstance(score_temp, tuple):
score_temp = (score_temp,)

return nuisance_temp, model, test_idxs, (score_temp if calculate_scores else None)


def _crossfit(model, use_ray, folds, ray_remote_fun_option, *args, **kwargs):
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I think it makes more sense for folds to come before the ray arguments (and certainly for the ray arguments to be adjacent), and these changes make the specification match the docstring.

Suggested change
def _crossfit(model, use_ray, folds, ray_remote_fun_option, *args, **kwargs):
def _crossfit(model, folds, use_ray=False, ray_remote_fun_option={}, *args, **kwargs):

"""
General crossfit based calculation of nuisance parameters.

Expand All @@ -60,6 +120,10 @@ def _crossfit(model, folds, *args, **kwargs):
function estimates a model of the nuisance function, based on the input
data to fit. Predict evaluates the fitted nuisance function on the input
data to predict.
use_ray: bool, default False (optional)
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Suggested change
use_ray: bool, default False (optional)
use_ray: bool, default False

having a default implies optional

Flag to indicate whether to use ray to parallelize the cross-fitting step.
ray_remote_fun_option: dict, default None (optional)
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Suggested change
ray_remote_fun_option: dict, default None (optional)
ray_remote_fun_option: dict, default {}

Having a default implies optional

Options to pass to the ray.remote decorator.
folds : list of tuple or None
The crossfitting fold structure. Every entry in the list is a tuple whose
first element are the training indices of the args and kwargs data and
Expand Down Expand Up @@ -115,7 +179,10 @@ def predict(self, X, y, W=None):
y = X[:, 0] + np.random.normal(size=(5000,))
folds = list(KFold(2).split(X, y))
model = Lasso(alpha=0.01)
nuisance, model_list, fitted_inds, scores = _crossfit(Wrapper(model), folds, X, y, W=y, Z=None)
use_ray = False
ray_remote_fun_option = {}
nuisance, model_list, fitted_inds, scores = _crossfit(Wrapper(model),use_ray, folds,ray_remote_fun_option,
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Suggested change
nuisance, model_list, fitted_inds, scores = _crossfit(Wrapper(model),use_ray, folds,ray_remote_fun_option,
nuisance, model_list, fitted_inds, scores = _crossfit(Wrapper(model), folds, use_ray, ray_remote_fun_option,

X, y,W=y, Z=None)

>>> nuisance
(array([-1.105728... , -1.537566..., -2.451827... , ..., 1.106287...,
Expand All @@ -127,9 +194,7 @@ def predict(self, X, y, W=None):

"""
model_list = []
fitted_inds = []
calculate_scores = hasattr(model, 'score')

# remove None arguments
kwargs = filter_none_kwargs(**kwargs)

Expand All @@ -150,46 +215,43 @@ def predict(self, X, y, W=None):
first_arr = args[0] if args else kwargs.items()[0][1]
return nuisances, model_list, np.arange(first_arr.shape[0]), scores


folds = list(folds)
fold_refs = []
if use_ray:
import ray
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Suggested change
import ray

Remove this line, and instead use the MissingModule pattern we use elsewhere in the library, putting something like this in the imports section at the top of the file:

try:
    import ray
except ImportError as exn:
    from .utilities import MissingModule

    # make any access to ray throw an exception
    ray = MissingModule("Ray is not a dependency of the base econml package; install econml[ray] or econml[all] to require it, "
                        "or install ray separately, to use functionality that depends on ray", exn)

This will make it so that any attempted use of the ray module within the file will fail with this message, without needing to put any additional try-except blocks into the various places throughout the file where that might happen

# Adding the kwargs to ray object store to be used by remote functions for each fold to avoid IO overhead
ray_args = ray.put(kwargs)
for idx, (train_idxs, test_idxs) in enumerate(folds):
fold_refs.append(
ray.remote(_fit_fold).options(**ray_remote_fun_option).remote(model, train_idxs, test_idxs,
calculate_scores, args, ray_args))
fitted_inds = []
for idx, (train_idxs, test_idxs) in enumerate(folds):
model_list.append(clone(model, safe=False))
if len(np.intersect1d(train_idxs, test_idxs)) > 0:
raise AttributeError("Invalid crossfitting fold structure." +
"Train and test indices of each fold must be disjoint.")
if use_ray:
nuisance_temp, model, test_idxs, score_temp = ray.get(fold_refs[idx])
else:
nuisance_temp, model, test_idxs, score_temp = _fit_fold(model, train_idxs, test_idxs,
calculate_scores, args, kwargs)

if len(np.intersect1d(fitted_inds, test_idxs)) > 0:
raise AttributeError("Invalid crossfitting fold structure. The same index appears in two test folds.")
raise AttributeError(
"Invalid crossfitting fold structure. The same index appears in two test folds.")
fitted_inds = np.concatenate((fitted_inds, test_idxs))

args_train = tuple(var[train_idxs] if var is not None else None for var in args)
args_test = tuple(var[test_idxs] if var is not None else None for var in args)

kwargs_train = {key: var[train_idxs] for key, var in kwargs.items()}
kwargs_test = {key: var[test_idxs] for key, var in kwargs.items()}

model_list[idx].fit(*args_train, **kwargs_train)

nuisance_temp = model_list[idx].predict(*args_test, **kwargs_test)

if not isinstance(nuisance_temp, tuple):
nuisance_temp = (nuisance_temp,)

if idx == 0:
nuisances = tuple([np.full((args[0].shape[0],) + nuis.shape[1:], np.nan) for nuis in nuisance_temp])

for it, nuis in enumerate(nuisance_temp):
nuisances[it][test_idxs] = nuis

if calculate_scores:
score_temp = model_list[idx].score(*args_test, **kwargs_test)

if not isinstance(score_temp, tuple):
score_temp = (score_temp,)

if idx == 0:
scores = tuple([] for _ in score_temp)

for it, score in enumerate(score_temp):
scores[it].append(score)

model_list.append(model)

return nuisances, model_list, np.sort(fitted_inds.astype(int)), (scores if calculate_scores else None)


Expand Down Expand Up @@ -297,6 +359,10 @@ class _OrthoLearner(TreatmentExpansionMixin, LinearCateEstimator):
mc_agg: {'mean', 'median'}, default 'mean'
How to aggregate the nuisance value for each sample across the `mc_iters` monte carlo iterations of
cross-fitting.
use_ray: bool, default False
Whether to use ray to parallelize the cross-fitting step.
ray_remote_func_options: dict, default None
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Suggested change
ray_remote_func_options: dict, default None
ray_remote_func_options: dict, default {}

Options to pass to the ray.remote decorator.

Examples
--------
Expand Down Expand Up @@ -346,6 +412,11 @@ def _gen_ortho_learner_model_final(self):
discrete_instrument=False, categories='auto', random_state=None)
est.fit(y, X[:, 0], W=X[:, 1:])

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Suggested change
# Or (for parallelization using ray)

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Sorry if my previous comment was unclear: I think including the comment is helpful for understanding why est is being redefined; it's just that it needs to be a comment so that the entire block is valid python code that can be run.

OR (for parallelization using ray))
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Suggested change
OR (for parallelization using ray))
# OR (for parallelization using ray)

Note that for us to run our doctests, this must be valid python code.

Also note that with your change we'll define est twice and call fit each time, only keeping the final result, but that's probably okay in this context.

est = OrthoLearner(cv=2, discrete_treatment=False, treatment_featurizer=None,
discrete_instrument=False, categories='auto', random_state=None,use_ray=True)
est.fit(y, X[:, 0], W=X[:, 1:])

>>> est.score_
0.00756830...
>>> est.const_marginal_effect()
Expand Down Expand Up @@ -434,7 +505,8 @@ def _gen_ortho_learner_model_final(self):
def __init__(self, *,
discrete_treatment, treatment_featurizer,
discrete_instrument, categories, cv, random_state,
mc_iters=None, mc_agg='mean'):
mc_iters=None, mc_agg='mean', use_ray=False, **ray_remote_func_options):
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Suggested change
mc_iters=None, mc_agg='mean', use_ray=False, **ray_remote_func_options):
mc_iters=None, mc_agg='mean', use_ray=False, ray_remote_func_options={}):

Make the dict explicit, as described in a review comment elsewhere.

self.actors = []
self.cv = cv
self.discrete_treatment = discrete_treatment
self.treatment_featurizer = treatment_featurizer
Expand All @@ -443,6 +515,8 @@ def __init__(self, *,
self.categories = categories
self.mc_iters = mc_iters
self.mc_agg = mc_agg
self.use_ray = use_ray
self.ray_remote_func_opt = ray_remote_func_options
super().__init__()

@abstractmethod
Expand Down Expand Up @@ -646,9 +720,30 @@ def fit(self, Y, T, *, X=None, W=None, Z=None, sample_weight=None, freq_weight=N
sample_weight_nuisances = sample_weight

self._models_nuisance = []

if self.use_ray:
# Initialize Ray Connection if not already initialized
try:
import ray
except ImportError:
raise ImportError("To use `use_ray=True`, try installing econml via pip3 install econml['ray'].")
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Suggested change
try:
import ray
except ImportError:
raise ImportError("To use `use_ray=True`, try installing econml via pip3 install econml['ray'].")

The MissingModule pattern should make this unnecessary.

if not ray.is_initialized():
ray.init(ignore_reinit_error=True)
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Why do we want to ignore reinit errors? And would we ever hit them, if we get to this line because ray is not initialized already?


# Define Ray remote function (Ray remote wrapper of the _fit_nuisances function)
def _fit_nuisances(Y, T, X, W, Z, sample_weight, groups):
return self._fit_nuisances(Y, T, X, W, Z, sample_weight=sample_weight, groups=groups)

# Create Ray remote jobs for parallel processing
self.nuiances_ref = [ray.remote(_fit_nuisances).options(**self.ray_remote_func_opt).remote(
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Why store these in an attribute when they only appear to be needed again on line 743 and then never again?

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And on a minor note, there's a typo if you do want to store it in an attribute:

Suggested change
self.nuiances_ref = [ray.remote(_fit_nuisances).options(**self.ray_remote_func_opt).remote(
self.nuisances_ref = [ray.remote(_fit_nuisances).options(**self.ray_remote_func_opt).remote(

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Its because or limitation on ray end , remote needs to be called on method or class. I will take care of the typo

Y, T, X, W, Z, sample_weight_nuisances, groups) for _ in range(self.mc_iters or 1)]

for idx in range(self.mc_iters or 1):
nuisances, fitted_models, new_inds, scores = self._fit_nuisances(
Y, T, X, W, Z, sample_weight=sample_weight_nuisances, groups=groups)
if self.use_ray:
nuisances, fitted_models, new_inds, scores = ray.get(self.nuiances_ref[idx])
else:
nuisances, fitted_models, new_inds, scores = self._fit_nuisances(
Y, T, X, W, Z, sample_weight=sample_weight_nuisances, groups=groups)
all_nuisances.append(nuisances)
self._models_nuisance.append(fitted_models)
if scores is None:
Expand All @@ -663,6 +758,10 @@ def fit(self, Y, T, *, X=None, W=None, Z=None, sample_weight=None, freq_weight=N
elif not np.array_equal(fitted_inds, new_inds):
raise AttributeError("Different indices were fit by different folds, so they cannot be aggregated")

# Shutdown Ray Connection
if self.use_ray and ray.is_initialized:
ray.shutdown()
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Is this always safe? Would this cause problems, for example, if someone tries to fit an OrthoLearner within a ray remote call?


if self.mc_iters is not None:
if self.mc_agg == 'mean':
nuisances = tuple(np.mean(nuisance_mc_variants, axis=0)
Expand Down Expand Up @@ -790,9 +889,9 @@ def _fit_nuisances(self, Y, T, X=None, W=None, Z=None, sample_weight=None, group
else:
folds = splitter.split(to_split, strata)

nuisances, fitted_models, fitted_inds, scores = _crossfit(self._ortho_learner_model_nuisance, folds,
Y, T, X=X, W=W, Z=Z,
sample_weight=sample_weight, groups=groups)
nuisances, fitted_models, fitted_inds, scores = _crossfit(self._ortho_learner_model_nuisance, self.use_ray,
folds, self.ray_remote_func_opt, Y, T, X=X, W=W,
Z=Z, sample_weight=sample_weight, groups=groups, )
return nuisances, fitted_models, fitted_inds, scores

def _fit_final(self, Y, T, X=None, W=None, Z=None, nuisances=None, sample_weight=None,
Expand All @@ -817,30 +916,35 @@ def const_marginal_effect(self, X=None):
return self._ortho_learner_model_final.predict()
else:
return self._ortho_learner_model_final.predict(X)

const_marginal_effect.__doc__ = LinearCateEstimator.const_marginal_effect.__doc__

def const_marginal_effect_interval(self, X=None, *, alpha=0.05):
X, = check_input_arrays(X)
self._check_fitted_dims(X)
return super().const_marginal_effect_interval(X, alpha=alpha)

const_marginal_effect_interval.__doc__ = LinearCateEstimator.const_marginal_effect_interval.__doc__

def const_marginal_effect_inference(self, X=None):
X, = check_input_arrays(X)
self._check_fitted_dims(X)
return super().const_marginal_effect_inference(X)

const_marginal_effect_inference.__doc__ = LinearCateEstimator.const_marginal_effect_inference.__doc__

def effect_interval(self, X=None, *, T0=0, T1=1, alpha=0.05):
X, T0, T1 = check_input_arrays(X, T0, T1)
self._check_fitted_dims(X)
return super().effect_interval(X, T0=T0, T1=T1, alpha=alpha)

effect_interval.__doc__ = LinearCateEstimator.effect_interval.__doc__

def effect_inference(self, X=None, *, T0=0, T1=1):
X, T0, T1 = check_input_arrays(X, T0, T1)
self._check_fitted_dims(X)
return super().effect_inference(X, T0=T0, T1=T1)

effect_inference.__doc__ = LinearCateEstimator.effect_inference.__doc__

def score(self, Y, T, X=None, W=None, Z=None, sample_weight=None, groups=None):
Expand Down
8 changes: 5 additions & 3 deletions econml/dml/_rlearner.py
Original file line number Diff line number Diff line change
Expand Up @@ -110,7 +110,7 @@ def score(self, Y, T, X=None, W=None, Z=None, nuisances=None, sample_weight=None
effects = self._model_final.predict(X).reshape((-1, Y_res.shape[1], T_res.shape[1]))
Y_res_pred = np.einsum('ijk,ik->ij', effects, T_res).reshape(Y_res.shape)
if sample_weight is not None:
return np.mean(np.average((Y_res - Y_res_pred)**2, weights=sample_weight, axis=0))
return np.mean(np.average((Y_res - Y_res_pred) ** 2, weights=sample_weight, axis=0))
else:
return np.mean((Y_res - Y_res_pred) ** 2)

Expand Down Expand Up @@ -272,15 +272,17 @@ def _gen_rlearner_model_final(self):
"""

def __init__(self, *, discrete_treatment, treatment_featurizer, categories,
cv, random_state, mc_iters=None, mc_agg='mean'):
cv, random_state, mc_iters=None, mc_agg='mean', use_ray=False, **ray_remote_func_options):
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Suggested change
cv, random_state, mc_iters=None, mc_agg='mean', use_ray=False, **ray_remote_func_options):
cv, random_state, mc_iters=None, mc_agg='mean', use_ray=False, ray_remote_func_options=ray_remote_func_options):

super().__init__(discrete_treatment=discrete_treatment,
treatment_featurizer=treatment_featurizer,
discrete_instrument=False, # no instrument, so doesn't matter
categories=categories,
cv=cv,
random_state=random_state,
mc_iters=mc_iters,
mc_agg=mc_agg)
mc_agg=mc_agg,
use_ray=use_ray,
**ray_remote_func_options)

@abstractmethod
def _gen_model_y(self):
Expand Down
10 changes: 8 additions & 2 deletions econml/dml/dml.py
Original file line number Diff line number Diff line change
Expand Up @@ -466,7 +466,10 @@ def __init__(self, *,
cv=2,
mc_iters=None,
mc_agg='mean',
random_state=None):
random_state=None,
use_ray=False,
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**ray_remote_func_options
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Suggested change
**ray_remote_func_options
ray_remote_func_options={}

I think it would be better to make this an explicit dictionary argument, rather than having it implicitly include any other keyword arguments passed to the DML initializer since in the future we might want similar arguments for other compute backends.

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(This also applies all the way up the hierarchy, to the RLearner and OrthoLearner initializer arguments)

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Fixed in latest commit

):
# TODO: consider whether we need more care around stateful featurizers,
# since we clone it and fit separate copies
self.fit_cate_intercept = fit_cate_intercept
Expand All @@ -481,7 +484,10 @@ def __init__(self, *,
cv=cv,
mc_iters=mc_iters,
mc_agg=mc_agg,
random_state=random_state)
random_state=random_state,
use_ray=use_ray,
**ray_remote_func_options
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Suggested change
**ray_remote_func_options
ray_remote_func_options=ray_remote_func_options

)

def _gen_featurizer(self):
return clone(self.featurizer, safe=False)
Expand Down
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