Workflow Description Language - Specification and Implementations

A free, legal BIOS replacement for the original Xbox

Configure workflow/pipeline tests using yaml files.

CLI for interacting with Cromwell servers

Rich IDE support for Workflow Description Language

An opinionated Cromwell orchestration manager.

Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources

Bioinformatics workflows developed for and used on the St. Jude Cloud project.

Create WDL documentation using Markdown.

Client for the Cromwell workflow engine

Command-line interface for Cromwell server

Robust Eukaryotic Annotation Toolkit

A command-line tool for executing, managing, and querying WDL workflows on Cromwell servers.

An integrated analysis platform for efficiently achieving computational reproducibility

ACES is a workflow to query small sequences in a large set of genomes. It provides several outputs including BLAST results, a multiple sequence alignment file, a graphical fragment assembly file, and a phylogenetic tree file.

A repo containing instructions for running a Cromwell server on Gizmo at the Fred Hutch. (Contact Amy Paguirigan for questions)

Web-based interface to the NMDC EDGE platform

Workflow management system benchmark

Dashboard for better visual at workflows on Cromwell server

WDL workflow language program, developed for singlecell rna sequencing data analysis, maintained by @OOAAHH(SunHao) .