bioinformatics genomics computational-biology cfdna epigenomics cell-free-dna bioinformatics-tool fragmentomics genomics-analysis

cli bioinformatics transcription-factors tui python3 feature-extraction plugin-system biomarker-discovery cfdna liquid-biopsy transcription-factor-binding-site fragmentomics transcription-start-site differential-transcription-factors-activity

deep-learning lung-cancer ovarian-cancer whole-genome-sequencing breast-cancer colon-cancer pancreatic-cancer early-detection fragmentomics fragmentation-patterns rectal-cancer gastric-cancer colon-adenoma rectal-adenoma bile-duct-cancer duodenal-cancer sub-clinical-disease dna-fragment-length identify-disease-stage early-detection-of-disease

scikit-learn clinical-trials lasso-regression colon-cancer blacklisting-filter unique-molecular-identifiers fragmentomics rectal-cancer limit-of-detection colon-adenoma rectal-adenoma detect-recurrence predict-relapse ultra-deep-sequencing tumor-agnostic-approach error-rates mutation-score dna-fragmentation-patterns detection-error-rates sensitivity-specificity