GCclassifier: An R package for the prediction of molecular subtypes of gastric cancer
-
Updated
Jan 22, 2024 - R
#
gastric-cancer
Here are 6 public repositories matching this topic...
This repository contains all codes used in the "The Gastric Microbiome and Gastric Carcinogenesis: Bacterial Diversity, Co-occurrence Patterns and Predictive Models" projects
-
Updated
Jul 29, 2022 - R
-
Updated
Nov 17, 2023 - R
voronoi-diagram
biomarker-discovery
breast-cancer
prostate-cancer
sobel-filter
drug-response-prediction
circulating-tumor-cells
circular-hough-transform
difference-of-gaussian
gastric-cancer
tubulin-inhibitors
intensity-histogram-thresholding
tubulin-bundling
tubulin-tyrosination
transcription-factor-localization
stationary-wavelet-transform
feature-eccentricity
microfluidics-chip-enrichment
brca1-drug-resistance
paclitaxel-therapy
-
Updated
Nov 26, 2023 - MATLAB
deep-learning
lung-cancer
ovarian-cancer
whole-genome-sequencing
breast-cancer
colon-cancer
pancreatic-cancer
early-detection
fragmentomics
fragmentation-patterns
rectal-cancer
gastric-cancer
colon-adenoma
rectal-adenoma
bile-duct-cancer
duodenal-cancer
sub-clinical-disease
dna-fragment-length
identify-disease-stage
early-detection-of-disease
-
Updated
Nov 26, 2023 - R
This repository contains the code and data for the recreation and enrichment of the gastric (GC) cancer single-cell RNA-seq (scRNA-seq) data analysis pipeline described in the "Comprehensive analysis of metastatic gastric cancer tumour cells using single‑cell RNA‑seq" by Wang B. et. al, using the raw counts matrix they provide.
python
machine-learning
clustering
pca
tsne
umap
spectral-clustering
single-cell-rna-seq
louvain-algorithm
ward-linkage
sc-rna-seq
scanpy
gmm-clustering
sc-rna-seq-analysis
average-linkage
leiden-algorithm
gastric-cancer
-
Updated
Jul 24, 2024 - Jupyter Notebook
Improve this page
Add a description, image, and links to the gastric-cancer topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the gastric-cancer topic, visit your repo's landing page and select "manage topics."