Quality Control Summary Pipeline for Array-based Genome Studio Projects (idats, raw genotype quality)
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Updated
Sep 7, 2021 - Python
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illumina-bead-chip
Here are 8 public repositories matching this topic...
Methylation array preprocessing.
bioconductor
preprocessing
combat
normalization
qc
hg19
sva
cpg
hm450k
illumina-bead-chip
methylation-arrays
minfi
batch-correction
swan-normalize
illumina-normalize
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Updated
Sep 6, 2018 - R
This package provides Illumina Mouse Methylation Array Manifest (12.v1, Genome Build mm10) compatible with minfi.
bioinformatics
mouse
methylation
methylation-microarrays
illumina-beadarrays
illumina-bead-chip
methylation-analysis
methylation-annotation
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Updated
Jul 11, 2024 - R
This package provides Illumina Mouse Methylation Array Annotation (12.v1, Genome Build mm10) compatible with minfi.
bioinformatics
illumina-bead-chip
methylation-arrays
minfi
methylation-analysis
methylation-annotation
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Updated
Jul 11, 2024 - R
Pipeline for the analysis of Illumina 450k DNA methylation data in R using the Bioconductor package minfi
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Updated
Sep 14, 2018 - Jupyter Notebook
Estimate tumor enrichment from methylation array data.
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Updated
Dec 1, 2017 - R
IMOM - A pipeline for interacting with, processing, and analyzing multi-OM datasets in phylogenetic and evolutionary context
bioinformatics
evolution
methylation
rnaseq
phylogeny
illumina-sequencing
illumina-bead-chip
rnaseq-analysis
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Updated
Oct 23, 2023 - R
The CGR GWAS QC processing workflow.
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Updated
Nov 11, 2024 - Python
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