Workflow for Simulation and Automatic Semantic Segmentation of Electron Microscopy Images

TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.

Functions for analysis of high resolution electron microscopy and spectroscopy data.

Fast multi-threaded hyperspectral total variational denoising

Alt V Server template Roleplay Created by kysta Dev

This repository holds Python scripts used for day-to-day data analysis required by my graduate degree.

A 3D finite-difference transient electromagnetic modeling open-source software, with a MATLAB version, a Fortran version and a Python version.

A MATLAB codebase to analyze TEM images of soot, which includes new methods associated with this project and a compilation of other pre-existing methods into a single package.

Control and Automation of Transmission Electron Microscopes

An algorithm that carries out both large-loop and small-loop TEM modeling.

TypeScript Library Template 🔥

Python wrapper for the scripting interface of Thermo Fisher Scientific and FEI microscopes.

A template repository used for building cli

Jython script templates for DTSA-II for simulating energy-dispersive x-ray spectroscopy (EDS)

Strain relaxation from a TEM foil using FEM

A plugin for the Xicam scientific data visualization and analysis software. Developed by the National Center for Electron Microscopy (NCEM).

Deep-Learning-Based Segmentation of Small Extracellular Vesicles in Transmission Electron Microscopy Images

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S/TEM Automated Nanoparticle Analysis